Return to main results Retrieve Phyre Job Id

Job DescriptionP33634
Confidence96.38%DateThu Jan 5 11:52:26 GMT 2012
Rank104Aligned Residues195
% Identity15%Templated1twya_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110.........120.........130.........140.........150.... .....160........
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Query Sequence  RVVSGETLLSYRMPQVLQRFRQRAPKVRLSLQSLNCYVIRDALLNDEADVGVFYRVGNDDAL. . . . NRRELGEQSLVLVA
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Template Sequence  ITISGSTSVARIXDVLAEKYNQQHPETYVAVQGVGSTAGISLLKKGVADIAXTSRYLTESEAQNTLHTFTLAFDGLAIVV
Template Known Secondary structure 

TT
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TTS
SSS


TTT

TT
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   30.........40.........50.........60.........70.........80.........90.........100.........
 
   169170.........180.... .....190.........200.........210........ .220..
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Query Sequence  SPQIADVDFTEPGRHN. . . . . . . . . . . . . . . . . ACSFIINEPQCVFRQIFESTLRQRRITVENTIEL. . . . . . . . . ISIE
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Template Conservation               
                                                                  
Template Sequence  NQANPVTNLTREQLYGIYKGQITNWKQVGGNDQKIAVVTREASSGTRYSFESLXGLTKTVKDREVSDVAPTALVVNSNSX
Template Known Secondary structure 
TT




TS

BGGGGTS
S
B

TT
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   110.........120.........130.........140.........150.........160.........170.........180.........
 
   223......230.........240.........250.........260. ........270.........280.......
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Query Sequence  SIKRCVAANIGVSYLPRFAVAKELECGELIELPFGEQSQ. . . . . . TITAMCAHHAGKAVSPAMHTFIQCVE
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Template Sequence  XKTLVNHNTQAVGFISIGSVDKSVKAIQFEKADPTSDNIAKHTYQLSRPFLILHYSDNADEQTKEFIAFLK
Template Known Secondary structure 
TTGGG

TTS
TTB


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   190.........200.........210.........220.........230.........240.........250.........260
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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