Job Description P33634 Confidence 99.74% Date Thu Jan 5 11:52:26 GMT 2012 Rank 22 Aligned Residues 203 % Identity 18% Template d1al3a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.80

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		P	D	G	E	L	R	V	V	S	G	E	T	L	L	S	Y	R	M	P	Q	V	L	Q	R	F	R	Q	R	A	P	K	V	R	L	S	L	Q	S	L	N	C	Y	V	I	R	D	A	L	L	N	D	E	A	D	V	G	V	F	Y	R	V	G	N	.	D	D	A	L	N	R	R	E	L	G	E	Q	S	L	V	L
Query Conservation																																																																	.
Alig confidence																																																																	.
Template Conservation
Template Sequence		D	K	G	S	L	Y	V	A	T	T	H	T	Q	A	R	Y	A	L	P	G	V	I	K	G	F	I	E	R	Y	P	R	V	S	L	H	M	H	Q	G	S	P	T	Q	I	A	E	A	V	S	K	G	N	A	D	F	A	I	A	T	E	A	L	H	L	Y	D	D	L	V	M	L	P	C	Y	H	W	N	R	S	I
Template Known Secondary structure																		T	S												T																				T	T			S					S	S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		167	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		V	A	S	P	Q	I	A	.	.	D	V	D	F	T	E	P	G	R	H	N	A	C	S	F	I	I	N	E	P	Q	C	V	F	R	Q	I	F	E	S	T	L	R	Q	R	R	I	T	V	E	N	T	I	E	L	I	S	I	E	S	I	K	R	C	V	A	A	N	I	G	V	S	Y	L	P	R	F	A	V	A	K
Query Conservation									.	.
Alig confidence									.	.																																																																						.
Template Conservation																																																																																.
Template Sequence		V	V	T	P	E	H	P	L	A	T	K	G	S	V	S	I	E	E	L	A	Q	Y	P	L	V	T	Y	T	F	G	F	T	G	R	S	E	L	D	T	A	F	N	R	A	G	L	T	P	R	I	V	F	T	A	T	D	A	D	V	I	K	T	Y	V	R	L	G	L	G	V	G	V	I	A	S	M	A	V	.	D
Template Known Secondary structure					T	T	S	T	T	T	T	T	S									T	S							T	T	S	T	T												T										S	S											T	S							G	G	G		.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	E	C	G	E	L	I	E	L	P	F	G	E	Q	S	Q	T	I	T	A	M	C	A	H	H	A	G	K	A	V	S	P	A	M	H	T	F	I	Q	C	V	E	E	S	F	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	S	D	P	D	L	V	K	L	D	A	N	G	I	F	S	H	S	T	T	K	I	G	F	R	R	S	T	F	L	R	S	Y	M	Y	D	F	I	Q	R	F	A	P	H	L	T
Template Known Secondary structure		T	T	T		T	T	S						B	T	T	B											T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions