Job Description P33634 Confidence 89.86% Date Thu Jan 5 11:52:26 GMT 2012 Rank 188 Aligned Residues 197 % Identity 9% Template c3muqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the crystal structure of a conserved functionally unknown protein from2 vibrio parahaemolyticus rimd 2210633 Resolution 2.05 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.								.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.
Query Sequence		E	L	R	V	V	S	G	E	T	L	L	S	Y	R	M	P	Q	V	L	Q	R	F	R	Q	R	A	P	K	V	R	L	S	L	Q	S	L	N	C	Y	V	I	R	D	A	L	L	N	D	E	A	D	V	G	V	F	Y	R	V	G	N	D	D	A	L	.	.	.	.	.	.	.	N	R	R	E	L	G	E	Q	S
Query Conservation																																																																		.	.	.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	V	R	L	A	T	T	T	S	T	Y	H	S	G	L	L	D	Y	L	L	P	Q	F	E	K	D	T	G	Y	K	V	D	V	I	A	A	G	T	G	K	A	L	K	X	G	E	N	G	D	V	D	L	V	X	T	H	A	P	K	A	E	G	T	F	V	E	K	G	Y	G	V	L	P	R	K	L	X	Y	N	D
Template Known Secondary structure															T	G	G	G	G	T																												T	T	S	S	S																T	T	S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.												.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	L	V	A	S	P	Q	I	A	D	V	D	F	T	E	P	G	R	H	N	A	C	S	F	I	I	N	E	P	Q	C	V	F	R	.	.	.	.	.	.	.	.	.	.	.	Q	I	F	E	S	T	L	R	Q	R	R	I	T	V	E	N	T	I	E	L	I	S	I	E	S	I	K	R	C	V	A	A	N	I
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	V	I	V	G	P	K	A	D	P	A	K	I	K	D	D	E	S	V	L	D	V	F	K	E	I	A	N	K	N	A	T	F	I	S	R	G	D	D	S	G	T	H	K	K	E	X	G	F	W	A	Q	T	K	I	E	P	N	F	G	G	Y	R	S	V	G	Q	G	X	G	P	T	L	N	X	A	S	E	X	Q
Template Known Secondary structure								T	T		T	T			T	T		S												T	T								S		S														T					S	T	T																			T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.					.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		G	V	S	Y	L	P	R	F	A	V	A	K	E	L	E	C	G	E	L	I	E	L	P	F	G	E	Q	S	Q	T	I	T	A	M	C	A	H	H	A	G	K	A	V	S	.	.	.	.	P	A	M	H	T	F	I	Q	C	V	E
Query Conservation																																														.	.	.	.
Alig confidence																																														.	.	.	.
Template Conservation
Template Sequence		G	Y	T	X	S	D	R	G	T	W	L	A	Y	Q	N	K	L	D	L	E	I	L	F	Q	G	D	E	K	L	F	N	P	Y	Q	V	I	L	V	N	P	E	R	Y	P	T	I	N	Y	Q	G	A	K	A	F	S	D	W	L	V
Template Known Secondary structure															G	G	G		S									G	G	G											T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions