Job Description P33634 Confidence 100.00% Date Thu Jan 5 11:52:26 GMT 2012 Rank 5 Aligned Residues 287 % Identity 20% Template c3hhgF_ PDB info PDB header:transcription regulator Chain: F: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga, a lysr-type transcriptional regulator from2 neisseria meningitidis. Resolution 3.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	L	R	R	F	I	T	L	K	T	V	V	E	E	G	S	F	L	R	A	S	Q	K	L	C	C	T	Q	S	T	V	T	F	H	I	Q	Q	L	E	Q	E	F	S	V	Q	L	F	E	K	I	G	R	R	M	C	L	T	R	E	G	K	K	L	L	P	H	I	Y	E	L	T	R	V	M	D	T	L	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	S	E	E	L	T	V	F	V	Q	V	V	E	S	G	S	F	S	R	A	A	E	Q	L	A	M	A	N	S	A	V	S	R	I	V	K	R	L	E	E	K	L	G	V	N	L	L	N	R	T	T	R	Q	L	S	L	T	E	E	G	A	Q	Y	F	R	R	A	Q	R	I	L	Q	E	M	A	A	A	E	T
Template Known Secondary structure																T	S	S	S					T	T	T	T																		T	S					T	T	S	S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	A	K	K	E	S	D	P	D	G	E	L	R	V	V	S	G	E	T	L	.	L	S	Y	R	M	P	Q	V	L	Q	R	F	R	Q	R	A	P	K	V	R	L	S	L	Q	S	L	N	C	Y	V	I	R	D	A	L	L	N	D	E	A	D	V	G	V	F	Y	R	V	G	N	D	D	A	L	N	R	R	E	L
Query Conservation																						.
Alig confidence																						.																															.	.	.
Template Conservation																																																					.	.	.
Template Sequence		E	M	L	A	V	H	E	I	P	Q	G	V	L	S	V	D	S	A	M	P	M	V	L	H	L	L	A	P	L	A	A	K	F	N	E	R	Y	P	H	I	R	L	S	L	V	S	S	E	G	Y	I	.	.	.	N	L	I	E	R	K	V	D	I	A	L	R	A	G	E	L	D	D	S	G	L	R	A	R	H	L
Template Known Secondary structure						T	T	S																		T												S	T	T									S	S	S		.	.	.				T	T	S	S	S							S				S	S
Template Predicted Secondary structure																																																					.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		G	E	Q	S	L	V	L	V	A	S	P	Q	I	A	D	.	.	V	D	F	T	E	P	G	R	H	N	A	C	S	F	I	I	N	E	P	Q	C	V	F	R	Q	I	F	E	S	T	L	R	Q	R	R	I	T	V	E	N	T	I	E	L	I	S	I	E	S	I	K	R	C	V	A	A	N	I	G	V	S	Y	L
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		F	D	S	R	F	R	V	I	A	S	P	E	Y	L	A	K	H	G	T	P	Q	S	T	E	E	L	A	G	H	Q	C	L	G	F	T	E	P	G	S	L	N	T	W	A	V	L	D	A	Q	G	N	P	Y	K	I	S	P	H	F	T	A	S	S	G	E	I	L	R	S	L	C	L	S	G	C	G	I	V	C	L
Template Known Secondary structure																						S	S	G	G	G	G	G	T	S						S	S	T	T	G	G	G							S	S	S	S							S	S			S	S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		P	R	F	A	V	A	K	E	L	E	C	G	E	L	I	E	L	.	P	F	G	E	Q	S	Q	T	I	T	A	M	C	A	H	H	A	G	K	A	V	S	P	A	M	H	T	F	I	Q	C	V	E	E	S	F
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		S	D	F	L	V	D	N	D	I	A	E	G	K	L	I	P	L	L	A	E	Q	T	S	D	K	T	H	P	F	N	A	V	Y	Y	S	D	K	A	V	N	L	R	L	R	V	F	L	D	F	L	V	E	E	L
Template Known Secondary structure													T	S	S					T	T	T	B													G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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