Job Description P33634 Confidence 61.33% Date Thu Jan 5 11:52:26 GMT 2012 Rank 280 Aligned Residues 43 % Identity 7% Template c3bs3A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of a putative dna-binding protein from bacteroides2 fragilis Resolution 1.65 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.												.	.	.	.	.	40	.	.	.	.	.	.	.
Predicted Secondary structure				.																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	D	.	L	R	R	F	I	T	L	K	T	V	V	E	E	G	S	F	L	R	A	S	Q	K	L	C	C	T	Q	S	T	V	T	F	.	.	.	.	.	.	.	.	.	.	.	H	I	Q	Q	L	E	Q	E	F	S	V	Q	L
Query Conservation				.																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.						.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.
Template Sequence		L	N	R	I	K	V	V	L	.	.	.	.	A	E	K	Q	R	T	N	R	W	L	A	E	Q	X	G	K	S	E	N	T	I	S	R	W	C	S	N	K	S	Q	P	S	L	D	X	L	V	K	V	A	E	L	L	N	V	D	P
Template Known Secondary structure			B							.	.	.	.			T	T											T											T	T	S	S															T	S		G
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions