 |
Job Description | P75782 | Confidence | 64.28% | Date | Thu Jan 5 12:14:04 GMT 2012 |
Rank | 330 | Aligned Residues | 86 |
% Identity | 12% | Template | d2jfga1 |
SCOP info | MurCD N-terminal domain
| MurCD N-terminal domain
| MurCD N-terminal domain
|
Resolution | 1.52 |
|
 |
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | N | A | S | I | L | D | I | G | V | G | A | N | C | I | Y | P | L | I | G | V | H | E | Y | G | W | R | F | T | G | S | E | T | S | S | Q | A | L | S | S | A | Q | A | I | I | S | S | N | P | G | L | N | R | A | I | R | L | R | R | Q | K | E | S | G | A | I | F | N | G | I | I | H | K | N | E | Q | Y | D | A | T |
Query Conservation |   |
  |   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |
|
|
|   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |
|   |
|
Template Sequence |   |
Q | G | K | N | V | V | I | I | G | L | G | L | T | G | L | S | C | V | D | F | F | L | A | R | G | V | T | P | R | V | M | D | T | R | M | T | P | P | G | L | D | . |
. |
. |
. |
. |
. |
. |
. |
K | L | P | E | A | V | E | R | H | T | G | S | L | N | D | E | W | L | . |
. |
. |
. |
. |
. |
. |
M | A | A | D | L | I |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  | S | S | S | S |
| T | T | G | G | . | . | . | . | . | . | . | . | G | S |
| T | T | S |
|  |  |  | S | B |
|
|  |  |  |  | . | . | . | . | . | . | . |  |  |
| S |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . |
  |
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | C | N | P | P | F | H | D | S | A | A | A | A | R | A | G | S | E | R | K | R |
Query Conservation |   |
|
|
|
|
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |   |   |   |
|   |
|   |   |
|   |   |   |
|
|
Template Sequence |   |
V | A | S | P | G | I | A | L | A | H | P | S | L | S | A | A | A | D | A | G | I |
Template Known Secondary structure |   |
 |  |
| T | T | S |
| T | T | S |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|