Job Description P75782 Confidence 99.65% Date Thu Jan 5 12:14:04 GMT 2012 Rank 10 Aligned Residues 196 % Identity 13% Template c3ocjA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: the crystal structure of a possilbe exported protein from bordetella2 parapertussis Resolution 1.39 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		D	G	F	L	C	P	P	V	P	G	R	A	D	Y	I	H	H	L	A	D	L	L	A	E	A	S	G	T	I	P	A	N	A	S	I	L	D	I	G	V	G	A	N	C	I	Y	P	L	I	G	V	H	E	.	Y	G	W	R	F	T	G	S	E	T	S	S	Q	A	L	S	S	A	Q	A	I	I	S	S	N	P
Query Conservation																																																							.
Alig confidence								.	.	.	.																.	.	.	.																									.																										.
Template Conservation								.	.	.	.																.	.	.	.																																																			.
Template Sequence		P	A	V	L	A	T	.	.	.	.	R	E	R	H	G	H	F	R	R	A	L	Q	R	H	L	.	.	.	.	R	P	G	C	V	V	A	S	V	P	C	G	W	X	S	E	L	L	A	L	D	Y	S	A	C	P	G	V	Q	L	V	G	I	D	Y	D	P	E	A	L	D	G	A	T	R	L	A	A	G	H	.
Template Known Secondary structure								.	.	.	.																.	.	.	.		T	T						T	T		T	T						T	S			T	T		T	T								S													T	T	S	.
Template Predicted Secondary structure								.	.	.	.																.	.	.	.																																																			.
Template SS confidence
		93	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.										.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																							.																					.	.	.	.	.	.	.	.	.
Query SS confidence																																							.																					.	.	.	.	.	.	.	.	.
Query Sequence		G	L	N	R	A	I	R	L	R	R	Q	K	E	S	G	A	I	F	N	G	I	I	H	K	N	E	Q	Y	D	A	T	L	C	N	P	P	F	.	H	D	S	A	A	A	A	R	A	G	S	E	R	K	R	R	N	L	G	L	.	.	.	.	.	.	.	.	.	N	K	D	D	A	L	N	F	G	G	Q	Q	Q
Query Conservation																																							.																					.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.														.																					.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		A	L	A	G	Q	I	T	L	H	R	Q	D	A	W	K	L	D	T	.	.	.	.	.	.	R	E	G	Y	D	L	L	T	S	N	G	L	N	I	Y	E	P	D	D	A	R	V	T	E	L	Y	R	R	F	W	Q	A	L	K	P	G	G	A	L	V	T	S	F	L	T	P	P	P	A	L	S	P	D	S	P	W
Template Known Secondary structure		T	T	G	G	G								G	G	G				.	.	.	.	.	.		S									S	S	G	G	G																																	T	T	T		T	T
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.							.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	W	C	E	G	G	E	V	T	F	I	K	K	M	I	E	E	S	K	G	F	A	K	Q	V	M	W	F	T	S	L	V	S	R	G	E	N	L	P	P	L	Y	R	A	L	T	D	V	G	A	V	K	V	V	K	K	E	M	A	Q	G	Q	K	Q	S	R	F	I	A	W
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.																															.
Template Conservation																										.	.	.	.	.	.	.	.																															.
Template Sequence		D	X	Q	A	I	D	P	H	D	L	Q	L	Q	Q	L	V	F	T	R	L	I	Q	P	R	.	.	.	.	.	.	.	.	W	N	A	L	R	T	H	A	Q	T	R	A	Q	L	E	E	A	G	F	T	D	L	R	F	E	D	D	R	A	R	.	L	F	P	T	V	I	A	R
Template Known Secondary structure			G	G	G	S															T	T			S	.	.	.	.	.	.	.	.																	T	T										T	T	S	.	S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.																															.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.									.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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