 |
Job Description | P75782 | Confidence | 91.63% | Date | Thu Jan 5 12:14:04 GMT 2012 |
Rank | 311 | Aligned Residues | 79 |
% Identity | 19% | Template | c3lx6B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:cytosine-specific methyltransferase; |
PDBTitle: structure of probable cytosine-specific methyltransferase from2 shigella flexneri
|
Resolution | 2.29 Å |
|
 |
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | |
|
|
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
Query Sequence |   |
A | N | A | S | I | L | D | I | G | V | G | A | N | C | I | Y | P | L | I | G | V | H | E | Y | G | W | R | F | T | . |
G | S | E | T | S | S | Q | A | L | S | S | A | Q | A | I | I | S | S | N | P | G | L | N | R | A | I | R | L | R | R | Q | K | E | S | G | A | I | F | N | G | I | I | H | K | N | E | Q | . |
. |
. |
Query Conservation |   |
  |   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   | . |
|   |
|
|   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |   |
|   |   |
|
|
|
|
|
|   |
|
|   |   | . | . |   |
|
|   |   |
|
|   |   |   |
|   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |
| . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Y | A | F | R | F | I | D | L | F | A | G | I | G | G | I | R | . |
. |
R | G | F | E | S | I | G | G | Q | C | V | F | T | S | E | W | N | K | H | A | V | R | T | Y | K | A | N | . |
. |
. |
. |
H | Y | C | D | P | A | T | H | H | F | N | E | D | I | R | D | I | T | L | S | H | Q | E | G | V | S | D | E | A | A | A |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  | T |
| T | T | T |  |  |  | . | . |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  | T | T | . | . | . | . | S |
|
|
| T | T | T |
|
|  |  | S | S | T |  |  |  |  |
| T | T |
| S | S |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  | . | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | |
|
|
|
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
179 | 180 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | D | A | T | L | C | N | P | P |
Query Conservation |   |
. | . | . | . | . | . | . | . | . |
|
|   |
|
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|
|
Template Sequence |   |
E | H | I | R | Q | H | I | P | E | H | D | V | L | L | A | G | F | P |
Template Known Secondary structure |   |
 |  |  |  |  |  | S |
|
|
| S |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|