Job Description P75782 Confidence 99.30% Date Thu Jan 5 12:14:04 GMT 2012 Rank 66 Aligned Residues 181 % Identity 13% Template c3lkdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of the type i restriction-modification2 system methyltransferase subunit from streptococcus3 thermophilus, northeast structural genomics consortium4 target sur80 Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		88	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure														.	.	.																										.	.	.
Query SS confidence														.	.	.																										.	.	.
Query Sequence		H	H	L	A	D	L	L	A	E	A	S	G	.	.	.	T	I	P	A	N	A	S	I	L	D	I	G	V	G	A	N	C	I	Y	P	L	I	G	V	H	.	.	.	E	Y	G	W	R	F	T	G	S	E	T	S	S	Q	A	L	S	S	A	Q	A	I	I	S	S	N	P	G	L	N	R	A	I	R	L	R	R
Query Conservation														.	.	.																										.	.	.
Alig confidence														.	.	.																										.	.	.
Template Conservation
Template Sequence		Q	P	V	A	K	L	X	T	Q	I	A	F	L	G	R	E	D	K	Q	G	F	T	L	Y	D	A	T	X	G	S	G	S	L	L	L	N	A	K	R	Y	S	R	Q	P	Q	T	V	V	Y	F	G	Q	E	L	N	T	S	T	Y	N	L	A	R	X	N	X	I	L	H	G	V	P	I	E	N	Q	F	L	H	N
Template Known Secondary structure														T	T		T	T		S	S						T	T		T	T	S	T	T	G	G	G						S		G	G	G								S															T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	E	S	G	A	I	F	N	G	I	I	H	K	N	E	Q	Y	D	A	T	L	C	N	P	P	F	H	D	S	A	A	A	A	R	A	G	S	E	R	K	R	R	N	L	G	L	N	K	D	D	A	L	N	F	G	G	Q	Q	Q	E	L	W	C	E	G	G	E	V	T	F	I	K	K	M	I	E	E	S	K
Query Conservation
Alig confidence													.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	T	L	D	E	D	W	P	T	Q	.	.	E	P	T	N	F	D	G	V	L	X	N	P	P	Y	S	A	K	W	S	A	S	S	G	F	X	D	D	P	R	F	S	P	F	G	K	L	A	P	K	S	K	.	.	.	.	.	.	.	.	.	.	.	.	A	D	F	A	F	L	L	H	G	Y	Y	H	L	K
Template Known Secondary structure		S		T	T	T	S		S			S	.	.	S				B	S								B	T							G	G	G	G	G	S	T	T	T	G	G	G	S	S				T	T		.	.	.	.	.	.	.	.	.	.	.	.												T	B
Template Predicted Secondary structure													.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.													.	.	.	.	.	340	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		G	F	A	K	Q	V	M	W	F	T	S	L	.	.	V	S	R	G	E	N	L	P	P	L	Y	R	A	L	T	D	V	G	A	V	K	V	V	K	K	E	M	A	Q	G
Query Conservation														.	.
Alig confidence														.	.																						.
Template Conservation																																					.
Template Sequence		Q	D	N	G	V	X	A	I	V	L	P	H	G	V	L	F	R	G	N	A	E	G	T	I	R	K	A	L	L	E	E	G	A	I	D	.	T	V	I	G	L	P	A	N
Template Known Secondary structure		T	T	T									T																			T	T				.							S	S
Template Predicted Secondary structure																																					.
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions