Job Description P75782 Confidence 99.51% Date Thu Jan 5 12:14:04 GMT 2012 Rank 29 Aligned Residues 160 % Identity 11% Template c3eeyJ_ PDB info PDB header:transferase Chain: J: PDB Molecule:putative rrna methylase; PDBTitle: crystal structure of putative rrna-methylase from clostridium2 thermocellum Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		D	Y	I	H	H	L	A	D	L	L	A	E	A	S	G	T	I	P	A	N	A	S	I	L	D	I	G	V	G	A	N	C	I	Y	P	L	I	G	V	H	E	.	Y	G	W	R	F	T	G	S	E	T	S	S	Q	A	L	S	S	A	Q	A	I	I	S	S	N	P	G	L	N	R	A	I	R	L	R	R	Q	K
Query Conservation																																											.
Alig confidence															.	.	.																										.																										.
Template Conservation															.	.	.																																																				.
Template Sequence		N	S	L	G	Q	S	H	D	Y	I	K	M	F	.	.	.	V	K	E	G	D	T	V	V	D	A	T	C	G	N	G	N	D	T	A	F	L	A	S	L	V	G	E	N	G	R	V	F	G	F	D	I	Q	D	K	A	I	A	N	T	T	K	K	L	T	D	L	.	N	L	I	D	R	V	T	L	I	K	D	G
Template Known Secondary structure															.	.	.			T	T						S			T	T	S												T	T								S															T	.	T		G	G	G						S
Template Predicted Secondary structure															.	.	.																																																				.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.				.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	G	A	I	F	N	G	I	I	H	K	N	E	Q	Y	D	A	T	L	C	N	P	P	F	H	D	S	A	A	A	A	R	A	G	S	E	R	K	R	R	N	L	G	L	N	K	D	D	A	L	N	F	G	G	Q	Q	Q	E	L	W	C	E	G	G	E	V	T	F	I	K	K	M	I	E	E	S	K	G	F
Query Conservation
Alig confidence							.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	Q	N	M	D	.	.	.	.	K	Y	I	D	C	P	V	K	A	V	M	F	N	L	G	Y	L	P	S	G	D	H	S	I	S	T	R	P	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	Q	A	L	S	K	A	M	E	L
Template Known Secondary structure		G	G	G	G	G	.	.	.	.	G	T			S										S			T	T	S		S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																															.	.	.	.	120	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		A	K	Q	V	M	W	F	T	S	L	V	S	R	G	E	N	.	.	.	.	.	L	P	P	L	Y	R	A	L	T	D	V	G	A	V	K	V	V	K	K	E	M	A	Q
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.
Template Conservation
Template Sequence		L	V	T	G	G	I	I	T	V	V	I	Y	Y	G	G	D	T	G	F	E	E	K	E	K	V	L	E	F	L	K	G	V	D	Q	K	K	F	I	V	Q	R	T	D	F
Template Known Secondary structure																S	S	S														T	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions