Job Description P75782 Confidence 96.16% Date Thu Jan 5 12:14:04 GMT 2012 Rank 299 Aligned Residues 161 % Identity 10% Template c3douA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase j; PDBTitle: crystal structure of methyltransferase involved in cell2 division from thermoplasma volcanicum gss1 Resolution 1.45 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	D	L	L	A	E	A	S	G	T	I	P	A	N	A	S	I	L	D	I	G	V	G	A	N	C	I	Y	P	L	I	G	V	H	E	Y	G	W	R	F	T	G	S	E	T	S	S	Q	A	L	S	S	A	Q	A	I	I	S	S	N	P	G	L	N	R	A	I	R	L	R	R	Q	K	E	S	G	A	I	F
Query Conservation
Alig confidence										.																											.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																											.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	F	L	L	D	R	Y	.	R	V	V	R	K	G	D	A	V	I	E	I	G	S	S	P	G	G	W	T	Q	V	L	N	S	L	.	.	A	R	K	I	I	S	I	D	L	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	X	E	E	I	A	G	V	R	F	I	R	C	D	I	F	K	E	T	I	F
Template Known Secondary structure										.			S		T	T							S		T	T								T	T	T	.	.		S							S	S		.	.	.	.	.	.	.	.	.	.	.	.					T	T								T	T	S	S	S
Template Predicted Secondary structure										.																											.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70													.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure					.	.	.	.	.
Query SS confidence					.	.	.	.	.
Query Sequence		N	G	I	.	.	.	.	.	I	H	K	N	E	Q	Y	D	A	T	L	C	N	P	P	F	H	D	S	A	A	A	A	R	A	G	S	E	R	K	R	R	N	L	G	L	N	K	D	D	A	L	N	F	G	G	Q	Q	Q	E	L	W	C	E	G	G	E	V	T	F	I	K	K	M	I	E	E	S	K	G	F	A
Query Conservation					.	.	.	.	.
Alig confidence					.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	D	I	D	R	A	L	R	E	E	G	I	E	K	V	D	D	V	V	S	D	A	X	A	K	V	S	G	I	P	S	R	D	H	A	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	I	G	Q	R	V	X	E	I	A	V	R	Y	L
Template Known Secondary structure												T		S	S														S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																													.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	V	M	W	F	T	S	L	V	S	R	G	E	N	L	P	P	L	Y	R	A	L	T	D	V	G	A	V	K	V	V	K	K	E	M	A	Q	G	Q	K	Q	S	R	F	I	A	W	T	F	M	N	D
Query Conservation
Alig confidence																												.										.	.	.
Template Conservation																												.										.	.	.
Template Sequence		R	N	G	G	N	V	L	L	K	Q	F	Q	G	D	X	T	N	D	F	I	A	I	W	R	K	N	.	F	S	S	Y	K	I	S	K	P	.	.	.	S	S	E	I	Y	I	X	F	F	G	F	K	A	E
Template Known Secondary structure														S	T										G	G	G	.										.	.	.
Template Predicted Secondary structure																												.										.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions