Job Description P75782 Confidence 98.94% Date Thu Jan 5 12:14:04 GMT 2012 Rank 169 Aligned Residues 171 % Identity 10% Template c3c6kC_ PDB info PDB header:transferase Chain: C: PDB Molecule:spermine synthase; PDBTitle: crystal structure of human spermine synthase in complex2 with spermidine and 5-methylthioadenosine Resolution 1.95 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		A	D	Y	I	H	H	L	A	D	L	L	A	E	A	S	G	T	I	P	A	N	A	S	I	L	D	I	G	V	G	A	N	C	I	Y	P	L	I	G	V	H	E	Y	G	W	R	F	T	G	S	E	T	S	S	Q	A	L	S	S	A	Q	A	I	I	S	S	N	P	G	L	N	R	.	A	I	R	L	R	R	Q
Query Conservation																																																																										.
Alig confidence										.	.	.	.																														.																															.
Template Conservation										.	.	.	.																														.
Template Sequence		L	A	Y	T	R	A	I	M	.	.	.	.	G	S	G	K	E	D	Y	T	G	K	D	V	L	I	L	G	G	G	D	G	G	I	L	C	E	I	V	K	L	.	K	P	K	M	V	T	M	V	E	I	D	Q	M	V	I	D	G	C	K	K	Y	M	R	K	L	D	N	L	K	G	D	C	Y	Q	V	L	I	E
Template Known Secondary structure									T	.	.	.	.	T	T	T					T	T									T	T									T	T	.			S							S																	S	S	B		S	S						S
Template Predicted Secondary structure										.	.	.	.																														.
Template SS confidence
		177	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	S	G	A	I	F	N	G	I	I	H	K	N	E	Q	Y	D	A	T	L	C	N	P	P	F	H	D	S	A	A	A	A	R	A	G	S	E	R	K	R	R	N	L	G	L	N	K	D	D	A	L	N	F	G	G	Q	Q	Q	E	L	W	C	E	G	G	E	V	T	F	I	K	K	M	I	E	E	S	K	G
Query Conservation
Alig confidence								.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	C	I	P	V	L	.	K	R	Y	A	K	E	G	R	E	F	D	Y	V	I	N	D	L	T	A	V	P	I	S	T	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	W	E	F	L	R	L	I	L	D	L	S	M	K
Template Known Secondary structure								.						T	T												S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.																																	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.
Predicted Secondary structure																			.	.	.																.	.																	.	.
Query SS confidence																			.	.	.																.	.																	.	.
Query Sequence		F	A	K	Q	V	M	W	F	T	S	L	V	S	R	G	E	N	.	.	.	L	P	P	L	Y	R	A	L	T	D	V	G	A	V	K	.	.	V	V	K	K	E	M	A	Q	G	Q	K	Q	S	R	F	I	.	.	A	W
Query Conservation																			.	.	.																.	.																	.	.
Alig confidence																			.	.	.																.	.																	.	.
Template Conservation
Template Sequence		V	L	K	Q	D	G	K	Y	F	T	Q	G	N	C	V	N	L	T	E	A	L	S	L	Y	E	E	Q	L	G	R	L	Y	C	P	V	E	F	S	K	E	I	V	C	V	P	S	Y	L	E	L	W	V	F	Y	T	V	W
Template Known Secondary structure		T														T	T													T	S	S	S	S												G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions