Job Description P75782 Confidence 60.59% Date Thu Jan 5 12:14:04 GMT 2012 Rank 334 Aligned Residues 212 % Identity 16% Template c2zwaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:leucine carboxyl methyltransferase 2; PDBTitle: crystal structure of trna wybutosine synthesizing enzyme2 tyw4 Resolution 1.70 Å

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		78	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.									.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure														.	.																.	.																					.	.	.	.	.	.	.	.
Query SS confidence														.	.																.	.																					.	.	.	.	.	.	.	.
Query Sequence		P	P	V	P	G	R	A	D	Y	I	H	H	.	.	L	A	D	L	L	A	E	A	S	G	T	I	P	A	N	.	.	A	S	I	L	D	I	G	V	G	A	N	C	I	Y	P	L	I	G	V	H	.	.	.	.	.	.	.	.	E	Y	G	W	R	F	T	G	S	E	T	S	S	Q	A	L	S	S	A	Q	A
Query Conservation														.	.																.	.																					.	.	.	.	.	.	.	.
Alig confidence														.	.																.	.																					.	.	.	.	.	.	.	.												.
Template Conservation																																																																								.
Template Sequence		S	P	C	I	N	R	G	Y	W	L	R	L	F	A	I	R	S	R	L	N	S	I	I	E	Q	T	P	Q	D	K	K	I	V	V	V	N	L	G	C	G	Y	D	P	L	P	F	Q	L	L	D	T	N	N	I	Q	S	Q	Q	Y	H	D	R	V	S	F	I	D	I	D	Y	.	S	D	L	L	K	I	K	I	E
Template Known Secondary structure																											S		T	T	S								T		T	T										T	T		G	G	G	G	G	G	S	S	S									.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		I	I	S	S	N	P	G	L	N	R	A	I	R	L	R	R	Q	K	E	S	G	A	I	F	N	G	I	I	H	K	N	E	Q	Y	D	A	T	L	C	N	P	P	F	H	D	S	A	A	A	A	R	A	G	S	E	R	K	R	R	N	L	G	L	N	K	D	D	A	L	N	F	G	G	Q	Q	Q	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																																																														.	.	.	.
Template Conservation
Template Sequence		L	I	K	T	I	P	E	L	S	K	I	I	G	L	S	E	D	K	D	Y	V	D	D	S	N	V	D	F	L	T	T	P	K	Y	L	A	R	P	C	D	L	N	D	S	K	M	F	S	T	L	L	N	E	C	Q	L	Y	D	P	N	V	V	K	V	F	V	A	E	V	S	L	A	Y	M	K	P	E	R	S	D
Template Known Secondary structure													T	T			S	S		S	S		S		T	T							S	S								T	T												T	T	T	T		T	T									S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
																			222	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	W	C	E	.	G	G	E	V	T	F	I	K	K	M	I	E	E	S	K	G	F	A	K	Q	V	M	W	F	T	S	L	V	S	R	G	E	N	L	P	P	L	Y	R	A	L	T	D	V	G	A	V	K	V	V	K	K	E	M	A	Q	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.																							.	.	.	.																															.
Template Conservation																																															.	.	.	.																															.
Template Sequence		S	I	I	E	A	T	S	K	M	E	N	S	H	F	I	I	L	E	Q	L	I	P	K	G	P	F	E	P	F	S	K	Q	M	L	A	H	F	K	R	N	D	S	P	L	Q	.	.	.	.	S	V	L	K	Y	N	T	I	E	S	Q	V	Q	R	F	N	K	L	G	F	A	Y	V	N	V	G	D	M	F	Q	.
Template Known Secondary structure									T	S	S	S											T	T		T	T	S													T	T					.	.	.	.	G	G	G	T			S											T	T												.
Template Predicted Secondary structure																																															.	.	.	.																															.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.					.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	Q	S	R	F	I	A	W	T	F	M	N	D	E	Q	R	R	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	W	E	S	A	D	E	A	T	K	K	E
Template Known Secondary structure		.	.	.	.	.	.	.					S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									312	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions