Job Description P75782 Confidence 97.76% Date Thu Jan 5 12:14:04 GMT 2012 Rank 280 Aligned Residues 103 % Identity 14% Template c1i4wA_ PDB info PDB header:transcription Chain: A: PDB Molecule:mitochondrial replication protein mtf1; PDBTitle: the crystal structure of the transcription factor sc-mttfb2 offers intriguing insights into mitochondrial transcription Resolution 2.60 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		D	Y	I	H	H	L	A	D	L	L	A	E	A	S	G	T	I	P	.	A	N	A	S	I	L	D	I	G	V	G	A	N	C	I	Y	P	L	I	G	V	H	E	Y	G	W	R	F	T	G	S	E	T	S	S	Q	A	L	S	S	A	Q	A	I	I	S	S	N	P	G	L	N	R	A	I	R	L	R	R	Q	K
Query Conservation																				.
Alig confidence																				.																																																	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.
Template Sequence		T	V	Y	N	K	I	F	D	K	L	D	L	T	K	T	Y	K	H	P	E	E	L	K	V	L	D	L	Y	P	G	V	G	I	Q	S	A	I	F	Y	N	K	Y	C	P	R	Q	Y	S	L	L	E	K	R	S	S	L	Y	K	F	L	N	A	K	F	E	G	S	.	.	.	.	.	P	L	Q	I	L	K	R	D
Template Known Secondary structure													G	G	G	T				T	T	T							S		T	T														S																			T	T	T	S	.	.	.	.	.	S						S
Template Predicted Secondary structure																																																																					.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.
		164	.	.						.	.	.	170	.	.	.	.	.	.	.	.	.	180										.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure					.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query Sequence		E	S	G	.	.	.	.	.	A	I	F	N	G	I	I	H	K	N	E	Q	Y	D	.	.	.	.	.	.	.	.	.	A	T	L	C	N	P	P	F	H	D	S	A
Query Conservation					.	.	.	.	.															.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	Y	D	W	S	T	Y	S	N	L	I	D	E	E	R	I	F	V	P	E	V	Q	S	S	D	H	I	N	D	K	F	L	T	V	A	N	V	T	G	E	G	S	E
Template Known Secondary structure		T	T									T	T	T	T		S	S							T	T	S													S	T	T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions