Return to main results Retrieve Phyre Job Id

Job DescriptionP09323
Confidence56.67%DateThu Jan 5 11:02:10 GMT 2012
Rank78Aligned Residues47
% Identity19%Templated2nn6h1
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution3.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   542.......550.........560.........570.........580.........590....
Predicted Secondary structure 


























Query SS confidence 




















































Query Sequence  AAGTIVKIFNTNHAFCLETEKGAEIVVHMGIDTVALEGKGFKRLVEEGAQVSA
Query Conservation    
 
     
 

       
 










 
 
  
   
  
  
  
Alig confidence 









..
















....



















Template Conservation 
 
 
  
  .. 
  


     
 
 
....
           



 
 
Template Sequence  VVGRITEVQQ. . KRWKVETNSRLDSVLLL. . . . SSMNELAMRGFLQEGDLISA
Template Known Secondary structure 

T..T
SSSS
S....S



S
SS


Template Predicted Secondary structure 
..




....










Template SS confidence 




















































   84.....90... ......100.........110 .........120.........130
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions