|   |
498 | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | E | L | V | S | P | I | T | G | D | V | V | A | L | D | Q | V | P | D | E | A | F | A | S | K | A | V | G | D | G | V | A | V | K | P | T | D | K | I | V | V | S | P | A | A | G | T | I | V | K | I | F | N | T | N | H | A | F | C | L | E | T | E | K | G | A | E | I | V | V | H | M | G | I | D | T | V | A | L |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|   |
|   |   |   |   |
|   |
|
|   |   |
|   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|
|   |   |
|   |
|
|   |
|   |   |
|   |
|   |
|
|
|   |   |   |
|
|   |
|   |
|
|   |
|   |   |   |   |
|   |
|
|   |   |
|   |
|   |   |
|   |   |
|   |
|
|
|   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
Template Sequence |   |
T | I | E | I | I | A | P | L | S | G | E | I | V | N | I | E | D | V | P | D | V | V | F | A | E | K | I | V | G | D | G | I | A | I | K | P | T | G | N | K | M | V | A | P | V | D | G | T | I | G | K | I | F | E | T | N | H | A | F | S | I | E | S | D | S | G | V | E | L | F | V | H | F | G | I | D | T | V | E | L |
Template Known Secondary structure |   |
|  |  |  |  |
| S | S | S |  |  |  |  |
| G | G | G | S | S |
|  |  |  |  | T | T | S | S |
|  |  |  |  |  |  |  |
| S | S |  |  |  |
| S | S | S |  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |
| S | B | S | G | G | G | G |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
  |   |
578 | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | K | G | F | K | R | L | V | E | E | G | A | Q | V | S | A | G | Q | P | I | L | E | M | D | L | D | Y | L | N | A | N | A | R | S | M | I | S | P | V | V | C | S | N | I | D | D | F | S | G | L | I | I | K | A | Q | G | H | I | V | A | G | Q | T | P | L | Y | E | I | K | K |
Query Conservation |   |
  |
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |   |   |
|   |   |
|
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   | . |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|
Template Sequence |   |
K | G | E | G | F | K | R | I | A | E | E | G | Q | R | V | K | V | G | D | T | V | I | E | F | D | L | P | L | L | E | E | K | A | K | S | T | L | T | P | V | V | I | S | N | M | D | E | I | K | E | L | . |
I | K | L | S | G | S | V | T | V | G | E | T | P | V | I | R | I | K | K |
Template Known Secondary structure |   |
T | T | T | T |  |  |  |
| S |
| T | T |
|  |  |
| T | T |
|  |  |  |  |  |
|  |  |  |  |  |  |  |
| S | B |
|
|  |  |  |  |  | T | T | G | G | G |
| S |  |  | . |  |  |
|
| S |  |  |
| T | T | T | S |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  | . |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
  |