Job Description P09323 Confidence 46.69% Date Thu Jan 5 11:02:10 GMT 2012 Rank 86 Aligned Residues 67 % Identity 18% Template d1smxa_ SCOP info OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.									.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.
Query Sequence		G	T	I	V	K	I	F	N	T	N	H	A	F	C	L	E	T	E	K	G	A	E	I	V	V	H	M	G	I	D	T	V	A	.	.	.	.	.	.	.	.	L	E	G	K	G	F	K	R	L	V	E	E	G	A	Q	V	S	A	G	Q	P	I	L	E	M	D	L	D	Y	L	N	A	N	A	R	S	M	I	S
Query Conservation																																			.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.
Template Sequence		G	K	I	T	R	I	E	P	S	L	E	A	A	F	V	D	Y	G	A	E	R	H	G	F	L	P	L	K	E	I	A	R	E	Y	F	P	A	N	Y	S	A	H	G	R	P	N	I	K	D	V	L	R	E	G	Q	E	V	.	.	.	.	.	I	V	Q	I	D	K	E	E	R	G	N	K	G	A	A	L	T	T
Template Known Secondary structure									G	G	G	T						S	S	S	S	S						G	G	G	S		G	G	G		S	S				S	S	S				G	G	G	T			T	T				.	.	.	.	.									B	T	T	B						S
Template Predicted Secondary structure																																																											.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions