Job Description P09323 Confidence 56.36% Date Thu Jan 5 11:02:10 GMT 2012 Rank 79 Aligned Residues 165 % Identity 11% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

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		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		M	M	F	G	L	P	G	A	A	L	A	M	Y	F	A	A	P	K	E	R	R	P	M	V	G	G	M	L	L	S	V	A	V	T	A	F	L	T	G	V	T	E	P	L	E	F	L	F	M	F	L	A	P	L	L	Y	L	L	H	A	L	L	T	G	I	S	L	F	V	A	T	L	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.
Template Sequence		T	L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H	K	G	K	A	S	I	V	D	M	A	N	A	A	L	A	G	G	V	A	I	G	S	V	C	N	I	.	.	.	.	.	.	.	V	G	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M
Template Known Secondary structure																					T	T	T											T	T							T	T	T	T	T	T	.	.	.	.	.	.	.	S																						T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280								.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
								309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.				.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																															.	.	.
Query SS confidence		.	.	.	.	.	.																																															.	.	.
Query Sequence		.	.	.	.	.	.	L	G	I	H	A	G	F	S	F	S	A	G	A	I	D	Y	A	L	M	Y	N	L	P	A	A	S	Q	N	V	W	M	L	L	V	M	G	V	I	F	F	A	I	Y	F	V	V	.	.	.	F	S	L	V	I	R	M	F	N	L	K	T	P	G	R	E	D	K	E	D	E	I	V	T	E
Query Conservation		.	.	.	.	.	.																																															.	.	.
Alig confidence		.	.	.	.	.	.																																															.	.	.
Template Conservation
Template Sequence		L	E	S	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P	G	I	A	V	A	Q	L	T	G	I	G	I	T	L	A	L	A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S	H	E	F	I	H	L
Template Known Secondary structure						S					T	T						T	T														S	T	T																													T	T				S	S	T	T		G	G	G	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	N	S	N	T	E	E	G	L	T	Q	L	A	T	N	Y	I	A	A	V	G	G	T	D	N	L	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	P	E	D	E	H	K	A	E	R	L	V	L	E	A	K	T	E	I	Q	G	L	K	N	R	I	D	A
Template Known Secondary structure				G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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