Job Description P00547 Confidence 100.00% Date Thu Jan 5 10:56:41 GMT 2012 Rank 4 Aligned Residues 260 % Identity 22% Template c2v34B_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-diphosphocytidyl-2c-methyl-d-erythritol kinase; PDBTitle: ispe in complex with cytidine and ligand Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.									.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.
Query Sequence		M	V	K	V	Y	A	P	A	S	S	A	N	M	S	.	.	.	.	.	.	.	.	V	G	F	D	V	L	G	A	A	V	T	P	V	D	G	A	L	L	G	D	V	V	T	V	E	A	A	E	T	F	S	L	N	N	L	G	R	F	A	D	K	L	P	S	E	P	R	E	N	I	V	Y	Q	C	W	E	R	F
Query Conservation																.	.	.	.	.	.	.	.
Alig confidence												.				.	.	.	.	.	.	.	.								.	.	.																								.	.	.	.	.	.	.
Template Conservation												.																			.	.	.																								.	.	.	.	.	.	.
Template Sequence		M	I	K	V	L	S	P	A	K	I	.	N	L	G	L	W	V	L	G	R	L	P	S	G	Y	H	E	I	L	.	.	.	T	L	Y	Q	E	I	P	F	Y	D	E	I	Y	I	R	E	G	V	L	R	V	E	T	.	.	.	.	.	.	.	N	I	G	I	P	Q	E	E	N	L	V	Y	K	G	L	R	E	F
Template Known Secondary structure												.											T	T	S						.	.	.																	S	S						.	.	.	.	.	.	.	S	S				G	G	G
Template Predicted Secondary structure												.																			.	.	.																								.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Q	E	L	G	K	Q	I	P	V	A	M	T	L	E	K	N	M	P	I	G	S	G	L	G	S	S	A	C	S	V	V	A	A	L	M	A	M	N	E	H	C	G	K	P	L	N	D	T	R	L	L	A	L	M	G	E	L	E	G	R	I	S	G	S	I	H	Y	D	N	V	A	P	C	F	L	G	G	M	Q
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.
Template Sequence		E	R	I	T	G	I	E	I	N	Y	S	I	F	I	Q	K	N	I	P	P	G	A	G	L	G	G	G	S	S	N	L	A	V	V	L	K	K	V	N	E	L	L	G	S	P	L	S	E	E	E	L	R	E	L	V	G	S	I	S	A	.	.	.	.	.	.	.	.	.	D	A	P	F	F	L	L	G	K	S	A
Template Known Secondary structure																			S		T	T	S	S	S																		T	T			S														T	.	.	.	.	.	.	.	.	.	T					T	T		S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.										130	.	.	.	.	.	.	.	.	.	140
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	I	E	E	N	D	I	I	S	Q	Q	V	P	G	F	D	E	W	L	W	V	L	A	Y	P	G	I	K	V	S	T	A	E	A	R	A	I	L	P	A	Q	Y	R	R	Q	D	C	I	A	H	G	R	H	L	A	G	F	I	H	A	C	Y	S	R	Q	P	E	L	A	A	K	L	M	K	D	V	I	A	E
Query Conservation
Alig confidence												.																																									.	.	.	.	.																			.	.	.	.	.
Template Conservation												.																																									.	.	.	.	.																			.	.	.	.	.
Template Sequence		I	G	R	G	K	G	E	V	L	E	.	P	V	E	T	E	I	S	G	K	I	T	L	V	I	P	Q	V	S	S	S	T	G	R	V	Y	S	S	L	R	E	E	H	F	V	T	P	E	Y	A	E	.	.	.	.	.	E	K	I	Q	R	I	I	S	G	E	V	E	E	I	E	N	V	L	.	.	.	.	.	G
Template Known Secondary structure					T	T	T	T				.								S								S	S										T			G	G	G									.	.	.	.	.								T	T		G	G	G			B			.	.	.	.	.
Template Predicted Secondary structure												.																																									.	.	.	.	.																			.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	R	E	R	L	L	P	G	F	R	Q	A	R	Q	A	V	A	E	I	G	A	V	A	S	G	I	S	G	S	G	P	T	L	F	A	L	C	D	K	P	E	T	A	Q	R	V	A	D	W	L	G	K	N	Y	L	Q	N	Q	E	G	F	V	H	I	C	R	L
Query Conservation
Alig confidence																					.																																.	.	.	.	.	.	.	.
Template Conservation																					.																																.	.	.	.	.	.	.	.
Template Sequence		D	I	A	R	E	L	Y	P	E	I	N	E	V	Y	R	F	V	E	Y	.	L	G	F	K	P	F	V	S	G	S	G	S	T	V	Y	F	F	G	G	A	S	E	E	L	K	K	A	A	K	M	R	.	.	.	.	.	.	.	.	G	W	K	V	V	E	L	E	L
Template Known Secondary structure																					.	T	T							T	T	S	S					S	S														.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																					.																																.	.	.	.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.									260	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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