Job Description P00547 Confidence 100.00% Date Thu Jan 5 10:56:41 GMT 2012 Rank 17 Aligned Residues 270 % Identity 16% Template c2oi2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:mevalonate kinase; PDBTitle: streptococcus pneumoniae mevalonate kinase in complex with2 diphosphomevalonate Resolution 2.50 Å

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		5	.	.	.	.	10	.	.	.	.						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		Y	A	P	A	S	S	A	N	M	S	.	.	.	.	.	V	G	F	D	V	L	G	A	A	V	T	P	V	D	G	A	L	L	G	D	V	V	T	V	E	A	A	E	T	F	S	L	N	N	L	G	R	F	A	D	K	L	P	S	E	P	R	E	N	I	V	Y	Q	C	W	E	R	F	C	Q	E	L	G	K	Q
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Sequence		Q	A	H	S	K	I	I	L	I	G	E	H	A	V	V	Y	G	Y	P	A	I	S	L	P	L	L	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	T	C	K	V	V	P	A	E	S	P	W	R	L	Y	E	E	D	T	L	S	M	A	V	Y	A	S	L	E	Y	L	N	.	.
Template Known Secondary structure												T	T	G	G	G	G	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S								S														T	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	V	A	M	T	L	E	K	N	M	P	I	G	S	G	L	G	S	S	A	C	S	V	V	A	A	L	M	A	M	N	E	H	C	G	K	P	L	N	D	T	R	L	L	A	L	M	G	E	L	E	G	R	I	S	G	S	I	H	Y	D	N	V	A	P	C	F	L	G	G	M	Q	L	M	I	E	E	N	D
Query Conservation
Alig confidence		.																																																																											.	.
Template Conservation		.																																																																											.	.
Template Sequence		.	I	T	E	A	C	I	R	C	E	I	D	E	K	R	G	M	G	S	S	A	A	I	S	I	A	A	I	R	A	V	F	D	Y	Y	Q	A	D	L	P	H	D	V	L	E	I	L	V	N	R	A	E	M	I	A	H	M	N	P	S	G	L	D	A	K	T	C	L	S	D	Q	P	I	R	F	.	.	I	K	N
Template Known Secondary structure		.		S												G	G	G	S																		T																			T	T					S							T		S	S					.	.		T	T
Template Predicted Secondary structure		.																																																																											.	.
Template SS confidence
			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.
Predicted Secondary structure																																																	.	.																									.
Query SS confidence																																																	.	.																									.
Query Sequence		I	I	S	Q	Q	V	P	G	F	D	E	W	L	W	V	L	A	Y	P	G	I	K	V	S	T	A	E	A	R	A	I	L	P	A	Q	Y	R	R	Q	D	C	I	A	H	G	R	H	.	.	L	A	G	F	I	H	A	C	Y	S	R	Q	P	E	L	A	A	K	L	M	K	D	V	I	.	A	E	P	Y	R	E
Query Conservation																																																	.	.																									.
Alig confidence																																																	.	.																									.
Template Conservation
Template Sequence		V	G	F	T	E	L	E	M	D	L	S	A	Y	L	V	I	A	D	T	G	V	Y	G	H	T	R	E	A	I	Q	V	V	Q	N	K	G	K	D	A	L	P	F	L	H	A	L	G	E	L	T	Q	Q	A	E	I	A	I	S	Q	K	D	A	E	G	L	G	Q	I	L	S	Q	A	H	L	H	L	K	E	I	G
Template Known Secondary structure		T										S									S	S														T	G	G	G	G																				T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		R	L	L	P	G	F	R	Q	A	R	Q	A	V	A	E	I	G	A	V	A	S	G	I	S	G	S	G	P	.	.	T	L	F	A	L	C	D	K	P	E	T	A	Q	R	V	A	D	W	L	G	K	N	Y	L	Q	N	Q	E	G	F	V	H	I	C	R	L
Query Conservation																														.	.
Alig confidence																														.	.																								.	.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence		V	S	S	L	E	A	D	S	L	V	E	T	A	L	S	H	G	A	L	G	A	K	M	S	G	G	G	L	G	G	C	I	I	A	L	V	T	N	L	T	H	A	Q	E	L	A	E	R	L	E	E	K	G	.	.	.	.	A	V	Q	T	W	I	E	S	L
Template Known Secondary structure																T	T	T		S						S	S	S	S	S	S							S																T	.	.	.	.		S
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions