Job Description P00547 Confidence 99.93% Date Thu Jan 5 10:56:41 GMT 2012 Rank 23 Aligned Residues 291 % Identity 18% Template c2hkeB_ PDB info PDB header:lyase Chain: B: PDB Molecule:diphosphomevalonate decarboxylase, putative; PDBTitle: mevalonate diphosphate decarboxylase from trypanosoma brucei Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.				.											.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.		.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.		.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	V	Y	A	P	A	S	S	A	N	M	.	.	.	S	.	.	.	.	.	.	.	.	.	.	V	G	F	D	V	L	G	A	A	V	T	P	V	D	G	A	L	L	G	D	V	V	T	V	E	A	A	E	T	F	S	L	N	N	L	G	R	F	A	D	K	L	P	S	E	P	R	E	N	I	V	Y	Q	C
Query Conservation														.	.	.		.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.		.	.	.	.	.	.	.	.	.	.															.	.	.																													.
Template Conservation																																										.	.	.																													.
Template Sequence		V	T	V	E	A	P	I	N	I	A	F	I	K	Y	W	G	K	R	E	G	G	E	T	L	I	L	P	T	N	D	S	F	S	I	T	L	S	A	S	P	.	.	.	F	R	S	K	T	S	V	E	L	R	D	D	I	E	T	D	T	L	R	L	N	G	T	E	V	D	V	G	.	K	T	P	R	V	Q	S	M
Template Known Secondary structure																		B		T	T		T	T	T	T		B	S	S							B		S	S	S	.	.	.	S										S	S		S	S						T	T					G	G	.	G
Template Predicted Secondary structure																																										.	.	.																													.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.
		69	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		W	E	R	F	C	.	.	.	Q	E	L	G	K	Q	I	P	V	A	M	T	L	E	K	N	M	P	I	G	S	G	L	G	S	S	A	C	S	V	V	A	A	L	M	A	M	N	E	H	C	G	K	P	L	N	D	T	R	L	L	A	L	M	G	E	L	E	G	R	I	S	G	S	I	H	Y	D	N	V	A	P
Query Conservation							.	.	.
Alig confidence							.	.	.																																																						.	.	.	.	.	.	.	.	.					.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.					.	.	.
Template Sequence		L	L	H	L	R	S	T	C	P	E	E	L	K	N	K	K	V	N	I	V	S	E	N	N	F	P	T	A	A	G	M	A	S	S	A	S	G	Y	C	A	M	S	A	A	L	I	R	A	F	K	S	T	T	N	V	S	M	L	A	R	L	.	.	.	.	.	.	.	.	.	G	S	G	S	.	.	.	A	C	R
Template Known Secondary structure							T	T	S		T	T	T	T	T	S												T	T	S																				T	T			S									.	.	.	.	.	.	.	.	.			G	G	.	.	.	G	G	G
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.					.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.										.	.	.	.				.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160									.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.																							.	.	.	.																							.	.
Query SS confidence																	.	.	.	.	.	.	.	.																							.	.	.	.																							.	.
Query Sequence		C	F	L	G	G	M	Q	L	M	I	E	E	N	D	I	.	.	.	.	.	.	.	.	I	S	Q	Q	V	P	G	F	D	E	W	L	W	V	L	A	Y	P	G	I	K	V	.	.	.	.	S	T	A	E	A	R	A	I	L	P	A	Q	Y	R	R	Q	D	C	I	A	H	G	.	.	R	H	L	A	G	F	I
Query Conservation																	.	.	.	.	.	.	.	.																							.	.	.	.																							.	.
Alig confidence																	.	.	.	.	.	.	.	.																							.	.	.	.																							.	.
Template Conservation
Template Sequence		S	A	F	G	G	F	V	I	W	N	K	G	E	K	P	D	G	S	D	C	V	A	T	Q	F	V	D	E	T	H	W	P	E	I	Q	V	M	C	A	V	L	K	G	A	Q	K	D	V	S	S	T	K	G	M	Q	Q	S	L	K	T	S	P	L	M	K	K	R	I	S	E	T	V	P	E	R	M	K	I	A	S
Template Known Secondary structure		T	T	S	S	S								S		T	T	S	T	T									T	T	S		T	T												S																	T	T							T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.										.	240	.	.	.	.	.	.	.	.	.						250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.												.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.												.	.	.	.	.
Query Sequence		H	A	C	Y	S	R	Q	P	E	L	A	A	K	L	M	K	D	V	I	A	E	P	Y	R	E	R	L	.	.	.	.	.	.	.	.	.	L	P	G	F	R	Q	A	R	Q	A	V	.	.	.	.	.	A	E	I	G	A	V	A	S	G	I	S	G	S	G	P	T	L	F	A	L	C	D	K	P	E	T	A	Q
Query Conservation																													.	.	.	.	.	.	.	.	.												.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.												.	.	.	.	.																							.
Template Conservation																																																																												.
Template Sequence		R	A	I	K	A	R	D	F	A	T	F	A	E	I	A	M	L	E	S	D	D	L	Q	E	I	C	A	T	T	E	P	K	I	T	Y	A	T	E	D	S	Y	A	M	I	R	L	V	K	A	Y	N	A	K	K	G	R	T	A	L	A	Y	T	F	D	A	G	A	N	C	F	L	F	V	L	.	K	E	D	L	P
Template Known Secondary structure							T																						T	S	S	S																								T	S									S	S	S								.	G	G	G
Template Predicted Secondary structure																																																																												.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.																																		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	A	D	W	L	G	K	N	Y	L	Q	N	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	V	H	I	C	R	L	D	T	A	G	A	R	V	L	E	N
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																																																										.
Template Sequence		E	A	V	A	M	L	M	E	H	F	P	T	P	F	E	K	F	F	F	G	D	R	E	L	L	E	K	V	K	V	V	S	L	P	D	E	Y	K	K	L	I	D	H	P	K	K	P	F	E	M	L	L	Q	S	P	V	.	G	C	G	V	K	Y	L	G	P
Template Known Secondary structure											S				G	G	G				S															G	G	G	S	S		S								S							B	.									G
Template Predicted Secondary structure																																																										.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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