Job Description P00547 Confidence 100.00% Date Thu Jan 5 10:56:41 GMT 2012 Rank 7 Aligned Residues 292 % Identity 15% Template c2hfuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:mevalonate kinase, putative; PDBTitle: crystal structure of l. major mevalonate kinase in complex2 with r-mevalonate Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure												.	.	.	.	.																																																	.	.	.	.	.
Query SS confidence												.	.	.	.	.																																																	.	.	.	.	.
Query Sequence		Y	A	P	A	S	S	A	N	M	S	.	.	.	.	.	V	G	F	D	V	L	G	A	A	V	T	P	V	D	G	A	L	L	G	D	V	V	T	V	E	A	A	E	T	F	S	L	N	N	L	G	R	F	A	D	K	L	P	S	E	P	R	E	.	.	.	.	.	N	I	V	Y	Q	C	W	E	R	F	C	Q
Query Conservation												.	.	.	.	.																																																	.	.	.	.	.
Alig confidence												.	.	.	.	.																.	.	.	.	.	.																												.	.	.	.	.
Template Conservation																																.	.	.	.	.	.
Template Sequence		I	G	Y	G	K	V	I	L	F	G	E	H	F	V	V	H	G	A	E	A	I	V	A	G	I	S	E	Y	T	E	.	.	.	.	.	.	C	R	L	E	I	N	P	G	V	P	G	L	Q	V	D	D	Q	R	P	A	I	P	G	Y	I	A	Q	K	R	D	E	Q	I	K	A	H	Q	L	V	L	D	H	L	K
Template Known Secondary structure												T	T	G	G	G	G	T														.	.	.	.	.	.							T	T			S											T	T																				T	T
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	G	K	Q	I	P	V	A	M	T	L	E	K	N	M	P	I	G	S	G	L	G	S	S	A	C	S	V	V	A	A	L	M	A	M	N	E	H	C	G	K	P	L	N	D	T	R	L	L	A	L	M	G	E	L	E	G	R	I	S	G	S	I	H	Y	D	N	V	A	P	C	F	L	G	G	M	Q	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	L	S	G	D	G	L	K	M	F	I	G	G	P	L	V	P	S	S	G	I	G	A	S	A	S	D	V	V	A	F	S	R	A	L	S	E	L	Y	Q	L	N	L	T	D	E	E	V	N	L	S	A	F	V	G	E	G	G	Y	H	G	T	P	S	G	A	D	N	T	A	A	T	Y	G	G	L	I	L	Y
Template Known Secondary structure		B			S	S	S									S					T	T	T	T																	T	T																G	G	G	T	S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		155	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.							.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure						.																																														.	.	.	.	.	.
Query SS confidence						.																																														.	.	.	.	.	.
Query Sequence		I	E	E	N	.	D	I	I	S	Q	Q	V	P	G	F	D	E	W	L	W	V	L	A	Y	P	G	I	K	V	S	T	A	E	A	R	A	I	L	P	A	Q	Y	R	R	Q	D	C	I	A	H	.	.	.	.	.	.	G	R	H	L	A	G	F	I	H	A	C	Y	S	R	Q	P	E	L	A	A	K	L	M	K
Query Conservation						.																																														.	.	.	.	.	.
Alig confidence						.																																														.	.	.	.	.	.
Template Conservation
Template Sequence		R	R	Q	N	G	K	S	V	F	K	P	I	A	F	Q	Q	R	L	Y	L	V	V	V	G	T	G	I	N	A	S	T	A	K	V	V	N	D	V	H	K	M	K	Q	Q	Q	P	V	Q	F	K	R	L	Y	D	N	Y	T	H	I	V	S	Q	A	R	E	A	L	Q	K	G	D	L	Q	R	L	G	Q	L	M	N
Template Known Secondary structure					T	T											S										S																																												T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure												.																												.	.
Query SS confidence												.																												.	.
Query Sequence		D	V	I	A	E	P	Y	R	E	R	.	L	L	P	G	F	R	Q	A	R	Q	A	V	A	E	I	G	A	V	A	S	G	I	S	G	S	G	P	.	.	T	L	F	A	L	C	D	K	P	E	T	A	Q	R	V	A	D	W	L	G	K	N	Y	L	Q	N	Q	E	G	F	V	H	I	C	R	L	D	T
Query Conservation												.																												.	.
Alig confidence												.																												.	.
Template Conservation
Template Sequence		A	N	H	D	L	C	R	Q	I	D	V	S	C	R	E	L	E	S	I	V	Q	T	C	R	T	Y	G	A	L	G	A	K	L	S	G	T	G	R	G	G	I	A	V	A	L	A	A	S	S	D	Q	R	D	A	I	V	K	G	L	K	A	K	C	P	E	A	K	F	I	W	R	Y	T	V	Q	P	S	A
Template Known Secondary structure										T	T																T	T		S						S	S		S	S	S							S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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