Phyre 2 alignment of P00547 with c2dclB

Job Description P00547
Confidence 11.28% Date Thu Jan 5 10:56:41 GMT 2012

Rank 75 Aligned Residues 64

% Identity 17% Template c2dclB_

PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical upf0166 protein ph1503; PDBTitle: structure of ph1503 protein from pyrococcus horikoshii ot3

Resolution 2.28 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.					260	.	.	.							.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																					.	.	.	.					.	.	.	.	.	.
Query SS confidence																					.	.	.	.					.	.	.	.	.	.
Query Sequence	P	G	F	R	Q	A	R	Q	A	V	A	E	I	G	A	V	A	S	G	I	.	.	.	.	S	G	S	G	.	.	.	.	.	.	P	T	L	F	A	L	C	D	K	P	E	T	A	Q	R	V	A	D	W	L	G	K	N	Y	L	Q	N	Q	E	G	F	V	H	I	C	R	L	D	T	A	G
Query Conservation																					.	.	.	.					.	.	.	.	.	.
Alig confidence																					.	.	.	.					.	.	.	.	.	.																									.
Template Conservation																																																											.
Template Sequence	P	L	Y	K	V	I	V	E	K	L	R	E	M	G	I	A	G	A	T	V	Y	R	G	I	Y	G	F	G	K	K	S	T	D	L	P	I	I	V	E	V	V	D	R	G	H	N	I	E	K	V	V	N	V	I	K	P	M	I	.	K	D	G	M	I	T	V	E	P	T	I	V	L	W	V	G
Template Known Secondary structure													T	T		S								S									S																						T	T	T		.	S	S	S
Template Predicted Secondary structure																																																											.
Template SS confidence
	26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

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Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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