Job Description P00547 Confidence 100.00% Date Thu Jan 5 10:56:41 GMT 2012 Rank 12 Aligned Residues 293 % Identity 17% Template c1wuuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:galactokinase; PDBTitle: crystal structure of human galactokinase complexed with2 mgamppnp and galactose Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																			.	.	.	.	.	60
Predicted Secondary structure													.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Y	A	P	A	S	S	A	N	M	S	.	.	.	.	.	V	G	F	D	V	L	G	A	A	V	T	P	V	D	G	A	L	L	G	D	V	V	T	V	E	A	A	E	T	F	S	L	N	N	L	G	R	F	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	P	S	E	P
Query Conservation													.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.																.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.
Template Sequence		V	S	A	P	G	R	V	N	L	I	G	E	H	T	D	Y	N	Q	G	L	V	L	P	X	A	L	E	L	X	T	V	.	.	.	.	.	.	L	V	G	S	P	R	K	D	G	L	V	S	L	L	T	T	S	E	G	A	D	E	P	Q	R	L	Q	F	P	L	P	T	A	Q	R	S	L	E	P	G	T	P	R
Template Known Secondary structure													T	T		G	G	G	T														.	.	.	.	.	.							T	T										S	S	S		S		S									S	S							S	S	G
Template Predicted Secondary structure																																	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	N	I	V	Y	Q	C	W	E	R	F	C	Q	E	L	G	K	Q	I	P	V	A	M	T	L	E	K	N	M	P	I	G	S	G	L	G	S	S	A	C	S	V	V	A	A	L	M	A	M	N	E	H	C	G	K	P	L	N	D	T	R	L	L	A	L	M	G	E	L	E	G	R	I	S	G	S	I	H	Y
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		W	A	N	Y	V	K	G	V	I	Q	Y	Y	.	.	P	A	A	P	L	P	G	F	S	A	V	V	V	S	S	V	P	L	G	G	G	L	S	S	S	A	S	L	E	V	A	T	Y	T	F	L	Q	Q	L	C	P	D	S	G	T	I	A	A	R	A	Q	V	C	Q	Q	A	E	H	S	F	A	G	X	P	C	G
Template Known Secondary structure		G	G											.	.	S	S	S													S		T	T	S	S	S																		S				S																	T
Template Predicted Secondary structure														.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
			141	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure		.											.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.											.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	D	N	V	A	P	C	F	L	G	G	.	.	.	M	Q	L	M	I	E	E	N	D	I	I	S	Q	Q	V	P	G	F	D	E	W	L	W	V	L	A	Y	P	G	I	K	V	S	T	A	E	A	R	A	I	L	P	A	Q	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.											.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.											.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	X	D	Q	F	I	S	L	X	G	Q	K	G	H	A	L	L	I	D	C	R	S	L	E	T	S	L	V	P	L	S	D	P	K	L	A	V	L	I	T	N	S	N	V	R	H	A	S	S	E	Y	P	V	R	R	R	Q	C	E	E	V	A	R	A	L	G	K	E	S	L	R	E	V	Q	L	E	E	L	E	A
Template Known Secondary structure		S											T	T							T	T	T											S	S														T	T	T															T	T		S	S	T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
													196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																									.	.																		.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																									.	.																		.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	R	R	Q	D	C	I	A	H	G	R	H	L	A	G	F	I	H	A	C	Y	S	R	Q	P	E	L	A	A	K	L	M	K	D	V	I	A	E	P	Y	R	.	.	E	R	L	L	P	G	F	R	Q	A	R	Q	A	V	A	E	I	.	G	A	V	A	S	G	I	S	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																									.	.																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																									.	.																		.
Template Conservation
Template Sequence		A	R	D	L	V	S	K	E	G	F	R	R	A	R	H	V	V	G	E	I	R	R	T	A	Q	A	A	A	A	L	R	R	G	D	Y	R	A	F	G	R	L	X	V	E	S	H	R	S	L	R	D	D	Y	E	V	S	C	P	E	L	D	Q	L	V	E	A	A	L	A	V	P	G	V	Y	G	S	R	X	T	G
Template Known Secondary structure		G	G	G	G	S																											T	T																			T	S																T	S	T	T								S
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		262	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		S	G	.	.	P	T	L	F	A	L	C	D	K	P	E	T	A	Q	R	V	A	D	W	L	G	K	N	Y	L	Q	N	Q	E	G	F	V	H	I	C	R	L	D	T	A	G	A	R	V	L
Query Conservation				.	.
Alig confidence				.	.									.																.	.													.
Template Conservation														.																.	.													.
Template Sequence		G	G	F	G	G	C	T	V	T	L	L	E	.	A	S	A	A	P	H	A	X	R	H	I	Q	E	H	Y	.	.	G	G	T	A	T	F	Y	L	S	Q	A	A	.	D	G	A	K	V	L
Template Known Secondary structure		S		S										.	G	G	G													.	.	S	S											.			S
Template Predicted Secondary structure														.																.	.													.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.			.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions