Job Description P00547 Confidence 100.00% Date Thu Jan 5 10:56:41 GMT 2012 Rank 8 Aligned Residues 260 % Identity 24% Template c1uekA_ PDB info PDB header:transferase Chain: A: PDB Molecule:4-(cytidine 5'-diphospho)-2c-methyl-d-erythritol PDBTitle: crystal structure of 4-(cytidine 5'-diphospho)-2c-methyl-d-2 erythritol kinase Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.									.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.
Query Sequence		V	K	V	Y	A	P	A	S	S	A	N	M	S	.	.	.	.	.	.	.	.	V	G	F	D	V	L	G	A	A	V	T	P	V	D	G	A	L	L	G	D	V	V	T	V	E	A	A	E	T	F	S	L	N	N	L	G	R	F	A	D	K	L	P	S	E	P	R	E	N	I	V	Y	Q	C	W	E	R	F	C
Query Conservation															.	.	.	.	.	.	.	.
Alig confidence											.				.	.	.	.	.	.	.	.								.	.	.																				.										.	.	.	.	.	.	.
Template Conservation											.																			.	.	.																				.										.	.	.	.	.	.	.
Template Sequence		M	E	R	L	A	P	A	K	V	.	N	L	G	L	S	V	R	F	R	R	E	D	G	Y	H	E	L	H	.	.	.	T	L	F	A	P	F	S	L	A	D	R	L	V	V	E	P	V	S	S	.	G	L	H	F	Q	G	P	Y	G	.	.	.	.	.	.	.	R	E	N	L	A	Y	R	A	A	S	L	Y	L
Template Known Secondary structure											.											T	T	S	S					.	.	.																		S	S	.						S	T	T	G	.	.	.	.	.	.	.	G	G	S
Template Predicted Secondary structure											.																			.	.	.																				.										.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	L	G	K	Q	I	P	V	A	M	T	L	E	K	N	M	P	I	G	S	G	L	G	S	S	A	C	S	V	V	A	A	L	M	A	M	N	E	H	C	G	K	P	L	N	D	T	R	L	L	A	L	M	G	E	L	E	G	R	I	S	G	S	I	H	Y	D	N	V	A	P	C	F	L	G	G	M	Q	L
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	A	G	Q	P	G	G	V	R	I	L	L	E	K	R	I	P	E	G	A	G	L	G	G	G	S	S	D	A	A	Q	V	L	L	A	L	Q	A	L	Y	P	A	E	V	D	L	F	A	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	T	L	G	A	D	V	P	F	F	L	L	G	R	G	A	E
Template Known Secondary structure				T	T													S		S	S	S	S	S																		S		S										.	.	.	.	.	.	.	.	.	.	.	.				T	T								S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120													.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	E	E	N	D	I	I	S	Q	Q	V	P	G	F	D	E	W	L	W	V	L	A	Y	P	G	I	K	V	S	T	A	E	A	R	A	I	L	P	A	Q	Y	R	R	Q	D	C	I	A	H	G	R	H	L	A	G	F	I	H	A	C	Y	S	R	Q	P	E	L	A	A	K	L	M	K	D	V	I	A	E	P
Query Conservation
Alig confidence													.	.																																						.	.	.	.	.																			.	.	.	.	.
Template Conservation													.	.																																						.	.	.	.	.																			.	.	.	.	.
Template Sequence		A	R	G	V	G	E	R	L	K	P	L	.	.	A	L	P	P	V	P	A	V	V	F	F	P	G	L	R	V	P	T	P	L	V	Y	R	A	V	R	P	E	D	F	G	P	D	L	P	V	E	.	.	.	.	.	A	I	L	E	A	L	A	R	G	E	E	P	P	Y	W	N	S	L	.	.	.	.	.	E	G
Template Known Secondary structure				T	T	T	T						.	.																								T			G	G	G									.	.	.	.	.									T				S			B	T	T	.	.	.	.	.
Template Predicted Secondary structure													.	.																																						.	.	.	.	.																			.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.						.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.						.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	E	R	L	L	P	G	F	R	Q	A	R	Q	A	V	A	E	I	G	A	V	A	S	G	I	S	G	S	G	P	T	L	F	A	L	C	D	K	P	E	T	A	Q	R	V	A	D	W	L	G	K	N	Y	L	Q	N	Q	E	G	F	V	H	I	C	R	L	D	T	A	G
Query Conservation
Alig confidence																																																							.	.	.	.	.	.									.
Template Conservation																																																							.	.	.	.	.	.									.
Template Sequence		P	A	F	R	L	F	P	E	L	K	E	V	R	G	R	M	R	A	L	G	L	R	G	V	L	M	S	G	S	G	S	A	F	F	G	L	A	E	G	P	D	H	A	R	R	A	A	E	A	L	R	A	W	.	.	.	.	.	.	G	R	A	W	A	G	T	L	.	G	G	G
Template Known Secondary structure								T												T	T								T	T	S	S							S	S												T	T	T	.	.	.	.	.	.	S								.
Template Predicted Secondary structure																																																							.	.	.	.	.	.									.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.							.	.	260	.	.	.	.	.		.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions