Job Description P00547 Confidence 100.00% Date Thu Jan 5 10:56:41 GMT 2012 Rank 5 Aligned Residues 297 % Identity 14% Template c1pieA_ PDB info PDB header:transferase Chain: A: PDB Molecule:galactokinase; PDBTitle: crystal structure of lactococcus lactis galactokinase2 complexed with galactose Resolution 2.10 Å

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		4	.	.	.	.	.	10	.	.	.	.						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60														.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Y	A	P	A	S	S	A	N	M	S	.	.	.	.	.	V	G	F	D	V	L	G	A	A	V	T	P	V	D	G	A	L	L	G	D	V	V	T	V	E	A	A	E	T	F	S	L	N	N	L	G	R	F	A	D	K	L	P	S	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	N	I	V
Query Conservation													.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.																.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.
Template Sequence		F	F	S	P	G	R	I	N	L	I	G	E	H	T	D	Y	N	G	G	Y	V	F	P	A	S	I	T	I	G	T	T	.	.	.	.	.	.	G	L	A	R	L	R	E	D	K	K	V	K	L	Y	S	E	N	F	P	K	L	G	V	I	E	F	D	L	D	E	V	E	K	K	D	G	E	L	W	S	N	Y	V
Template Known Secondary structure														S		T	T	T	T														.	.	.	.	.	.							S	S	S							T	T		G	G	G							T	T		T	T	S			T	T		T
Template Predicted Secondary structure																																	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.
Predicted Secondary structure																	.																																																													.
Query SS confidence																	.																																																													.
Query Sequence		Y	Q	C	W	E	R	F	C	Q	E	L	G	K	Q	I	.	P	V	A	M	T	L	E	K	N	M	P	I	G	S	G	L	G	S	S	A	C	S	V	V	A	A	L	M	A	M	N	E	H	C	G	K	P	L	N	D	T	R	L	L	A	L	M	G	E	L	E	G	R	I	S	G	S	I	H	Y	.	D	N	V
Query Conservation																	.																																																													.
Alig confidence																	.																																																													.
Template Conservation
Template Sequence		K	G	M	I	V	M	L	K	G	A	G	Y	E	I	D	K	G	F	E	L	L	I	K	G	E	I	P	T	A	S	G	L	S	S	S	A	S	L	E	L	L	V	G	V	V	L	D	D	L	F	N	L	N	V	P	R	L	E	L	V	Q	L	G	Q	K	T	E	N	D	Y	I	G	V	N	S	G	I	L	D	Q
Template Known Secondary structure											T	T					S										S		T	T	S	S	S																		T	T																			T	T						S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		144	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.																																	.	.	.	.
Predicted Secondary structure									.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	C	F	L	G	G	.	.	.	M	Q	L	M	I	E	E	N	D	I	I	S	Q	Q	V	P	G	F	D	E	W	L	W	V	L	A	Y	P	G	I	K	V	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	A	R
Query Conservation									.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	I	G	F	G	E	V	K	K	A	I	E	L	D	C	N	T	L	K	Y	E	M	V	P	V	E	L	R	D	Y	D	I	V	I	M	N	T	N	K	P	R	A	L	T	E	S	K	Y	N	E	R	F	A	E	T	R	E	A	L	K	R	M	Q	T	R	L	D	I	Q	S	L	G	E	L	S	N	E	E	F
Template Known Secondary structure								B	T	T							T	T	T											T	T														T	T																									S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		189	190	.	.	.	.	.	.								.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.																																								.	.																	.
Query SS confidence										.	.	.	.	.	.	.																																								.	.																	.
Query Sequence		A	I	L	P	A	Q	Y	R	.	.	.	.	.	.	.	R	Q	D	C	I	A	H	G	R	H	L	A	G	F	I	H	A	C	Y	S	R	Q	P	E	L	A	A	K	L	M	K	D	V	I	A	E	P	Y	R	.	.	E	R	L	L	P	G	F	R	Q	A	R	Q	A	V	A	E	.	I	G	A	V	A	S	G
Query Conservation										.	.	.	.	.	.	.																																								.	.																	.
Alig confidence										.	.	.	.	.	.	.																																								.	.																	.
Template Conservation
Template Sequence		D	A	N	T	D	L	I	G	D	E	T	L	I	K	R	A	R	H	A	V	Y	E	N	N	R	T	K	I	A	Q	K	A	F	V	A	G	N	L	T	K	F	G	E	L	L	N	A	S	H	A	S	L	K	D	D	Y	E	V	T	G	L	E	L	D	T	L	A	E	T	A	Q	K	Q	A	G	V	L	G	A	R
Template Known Secondary structure				T	G	G	G	T																													T																			T	S																	S	T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		259	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.																											.	.
Query SS confidence							.	.																											.	.
Query Sequence		I	S	G	S	G	.	.	P	T	L	F	A	L	C	D	K	P	E	T	A	Q	R	V	A	D	W	L	G	K	N	Y	L	Q	.	.	N	Q	E	G	F	V	H	I	C	R	L	D	T	A	G	A	R	V	L
Query Conservation							.	.																											.	.
Alig confidence							.	.									.																		.	.													.
Template Conservation																	.																																.
Template Sequence		M	T	G	A	G	F	G	G	C	A	I	A	L	V	A	.	H	D	N	V	S	A	F	R	K	A	V	G	Q	V	Y	E	E	V	V	G	Y	P	A	S	F	Y	V	A	Q	I	G	.	S	G	S	T	K	L
Template Known Secondary structure				S	S		S	S	S								.	G	G	G																	S	S									B		.			S	B
Template Predicted Secondary structure																	.																																.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390		.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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