Job Description P00547 Confidence 100.00% Date Thu Jan 5 10:56:41 GMT 2012 Rank 14 Aligned Residues 278 % Identity 12% Template c1k47F_ PDB info PDB header:transferase Chain: F: PDB Molecule:phosphomevalonate kinase; PDBTitle: crystal structure of the streptococcus pneumoniae2 phosphomevalonate kinase (pmk) Resolution 2.42 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.							.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		M	V	K	V	Y	A	P	A	S	S	A	N	M	S	.	.	.	.	.	.	V	G	F	D	V	L	G	A	A	V	T	P	V	D	G	A	L	L	G	D	V	V	T	V	E	A	A	E	T	F	S	L	N	N	L	G	R	F	A	D	K	L	P	S	E	P	R	E	N	I	V	Y	Q	C	W	E	R	F	C	Q
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.																.	.	.	.	.	.																						.	.	.	.
Template Conservation																																					.	.	.	.	.	.																						.	.	.	.
Template Sequence		X	I	A	V	K	T	C	G	K	L	Y	W	A	G	E	Y	A	I	L	E	P	G	Q	L	A	L	I	K	D	I	P	I	Y	X	R	.	.	.	.	.	.	A	E	I	A	F	S	D	S	Y	R	I	Y	S	D	X	N	P	D	Y	S	L	.	.	.	.	I	Q	E	T	I	A	L	X	G	D	F	L	A	V
Template Known Secondary structure																T	T	G	G	G	S	T	T														.	.	.	.	.	.							S	S														.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.																						.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.							.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		E	L	G	K	Q	I	P	V	A	M	T	L	E	K	N	M	P	I	G	S	.	.	.	G	L	G	S	S	A	C	S	V	V	A	A	L	M	A	M	N	E	H	C	G	K	P	L	N	D	T	R	L	L	A	L	M	G	E	L	E	G	R	I	S	G	S	I	H	Y	D	N	V	A	P	C	F	L	G	G	M
Query Conservation																						.	.	.
Alig confidence																						.	.	.
Template Conservation
Template Sequence		R	G	Q	N	L	R	P	F	S	L	A	I	Y	G	K	X	E	R	E	G	K	K	F	G	L	G	S	S	G	S	V	V	V	L	V	V	K	A	L	L	A	L	Y	N	L	S	V	D	Q	N	L	L	F	K	L	T	S	A	V	L	L	K	R	G	D	N	G	S	X	G	D	L	A	C	I	A	A	E	D	L
Template Known Secondary structure		T	T												S	T	T	T	T	T		S	T	T		S																		T	T																				T			S											T	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.																						.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	M	I	E	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	I	S	Q	Q	V	P	G	F	D	E	W	L	W	V	L	A	Y	P	G	I	K	V	S	T	A	E	A	R	A	I	L	P	A	Q	Y	R	R	Q	D	C	I	A	H	G	R	H	L	A	G	F
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	Y	Q	S	F	D	R	Q	K	V	A	A	W	L	E	E	E	N	L	A	T	V	L	E	R	D	W	G	F	S	I	S	Q	V	K	P	T	L	E	C	D	F	L	V	G	W	T	K	E	V	A	V	S	S	H	X	V	Q	Q	I	K	Q	N	I	N	Q	N	F	L	T	S	S	K	E	T	V	V	S	L
Template Known Secondary structure																			S								S													S																								T	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																												.	.	.																											.	.
Query SS confidence																												.	.	.																											.	.
Query Sequence		I	H	A	C	Y	S	R	Q	P	E	L	A	A	K	L	M	K	D	V	I	A	E	P	Y	R	E	.	.	.	R	L	L	P	G	F	R	Q	A	R	Q	A	V	A	E	I	G	A	V	A	S	G	I	S	G	S	.	.	G	P	T	L	F	A	L	C	D	K	P	E	T	A	Q	R	V	A	D	W	L	G	K
Query Conservation																												.	.	.																											.	.
Alig confidence																												.	.	.																			.								.	.
Template Conservation																																																	.
Template Sequence		V	E	A	L	E	Q	G	K	S	E	K	I	I	E	Q	V	E	V	A	S	K	L	L	E	G	L	S	T	D	I	Y	T	P	L	L	R	Q	L	K	E	A	S	Q	D	L	Q	A	.	V	A	K	S	S	G	A	G	G	G	D	C	G	I	A	L	S	F	D	A	Q	S	T	K	T	L	K	N	R	W	A	D
Template Known Secondary structure							T	T																					T	T	S	S										T	T	T	T	S	S		.						S	S		S	S	S								S
Template Predicted Secondary structure																																																	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		286	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	I	E
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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