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Job DescriptionP76369
Confidence27.76%DateWed Jan 25 15:21:08 GMT 2012
Rank397Aligned Residues195
% Identity11%Templated1pc3a_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.16

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130.........140.........150...... ...160.........170...
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Query Sequence  GVDDTFPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSS. . . . SEFGFSRLGDLEQVFAV
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Template Sequence  ETGSTLLYPLFNLWGPAFHERYPNVTITAQGTGSGAGIAQAAAGTVNIGASDAYLSEGDMAAHKGLMNIALAISAQQVNY
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TTTSTT

B

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   32.......40.........50.........60.........70.........80.........90.........100.........110.
 
   174.....180.........190... ......200.........210........
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Query Sequence  APHHPLALEEEPLNRRIIKR. . . . . . . . . . . . . . . . . . . . . . . . . . . YRAIVVGDTAQAGASTASQLLDEQE. . . . . . . .
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Template Sequence  NLPGV. . SEHLKLNGKVLAAMYQGTIKTWDDPQIAALNPGVNLPGTAVVPLHRSDGSGDTFLFTQYLSKQDPEGWGKSPG
Template Known Secondary structure 

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   112.... ...120.........130.........140.........150.........160.........170.........180.........
 
   219220.........230....... ..240.........250.........260
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Query Sequence  . . . . . . . . . . . . AITVFDFKTKLELQISGLG. CGYLPRYLAQRFLDSGALIEKKV. . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  FGTTVDFPAVPGALGENGNGGMVTGCAETPGCVAYIGISFLDQASQRG. LGEAQLGNSSGNFLLPDAQSIQAAAAGFASK
Template Known Secondary structure 
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   190.........200.........210.........220.........230....... ..240.........250.........260........
 
   261........270......... 280.........290.....
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Query Sequence  . . . . . . . . . . . . . . . VAQTLFEPVWIGWNEQTAG. . . . LASGWWRDEILANSAI
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Template Sequence  TPANQAISMIDGPAPDGYPIINYEYAIVNNRQKDAATAQTLQAFLHWAITDGNK
Template Known Secondary structure 

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   269270.........280.........290.........300.........310.........320..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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