Job Description P76369 Confidence 27.35% Date Wed Jan 25 15:21:08 GMT 2012 Rank 400 Aligned Residues 73 % Identity 8% Template d1okra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.4

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																								.	.					.	.	.	.																														.	.	.	.	.
Query SS confidence																								.	.					.	.	.	.																														.	.	.	.	.
Query Sequence		K	P	L	L	D	V	L	M	I	L	D	A	L	E	K	E	G	S	F	A	A	A	.	.	S	A	K	L	.	.	.	.	Y	K	T	P	S	A	L	S	Y	T	V	H	K	L	E	S	D	L	N	I	Q	L	L	D	R	S	G	H	R	.	.	.	.	.	A	K	F	T	R	T	G	K	M	L	L	E	K	G
Query Conservation																								.	.					.	.	.	.																														.	.	.	.	.
Alig confidence																								.	.					.	.	.	.																	.	.	.											.	.	.	.	.
Template Conservation																																																		.	.	.
Template Sequence		E	I	S	S	A	E	W	E	V	M	N	I	I	W	M	K	K	Y	A	S	A	N	N	I	I	E	E	I	Q	M	Q	K	D	W	S	P	K	T	I	R	T	L	I	T	R	L	Y	K	.	.	.	K	G	F	I	D	R	K	K	D	N	K	I	F	Q	Y	Y	S	L	V	E	E	S	D	I	K	Y	K	T	S
Template Known Secondary structure																		S	S																															.	.	.		T	S							T	T							S	S
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		71	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	V	L	H	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	F	I	N	K	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions