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Job DescriptionP76369
Confidence99.74%DateWed Jan 25 15:21:08 GMT 2012
Rank15Aligned Residues202
% Identity14%Templatec3oxnD_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:putative transcriptional regulator, lysr family; PDBTitle: the crystal structure of a putative transcriptional regulator from2 vibrio parahaemolyticus
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  EGWENELVIGVDDTFPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFGFSRLGDLE
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Template Sequence  QQCDQTFTIATTDYAXQTILPFALPRIYQEAPNVSFNFLPLQHDRLSDQLTYEGADLAICRPTG. . PVEPLRSEILGRVG
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   112.......120.........130.........140.........150.........160.........170..... ....180.........
 
   169170.........180.........190.........200...... ...210.........220.........230.........240.....
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Query Sequence  QVFAVAPHHPLALEEEPLNRRIIKRYRAIVVGDTAQAG. . . ASTASQLLDEQEAITVFDFKTKLELQISGLGCGYLPRYL
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Template Sequence  VLCLLSKQHPL. . ANQEXSLDDYLSHPHAXIAISDGVKALIEQALIDKPQRKXVLRAYHLEAALAIVDTLPIIITVPADL
Template Known Secondary structure  TTSGG..GSS


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   190.........200 .........210.........220.........230.........240.........250.........260.......
 
   246...250.........260.........270...... ...280.........290....
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Query Sequence  AQRFLDSGALIEKKVVAQTLFEPVWIGWNEQ. TAGLASGWWRDEILANSA
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Template Sequence  AYLVAERYDLVVKPLPFQFTPFDYSXIWHARCEHSPAQEWLRSVVREECS
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   268.270.........280.........290.........300.........310.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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