Job Description P76369 Confidence 99.15% Date Wed Jan 25 15:21:08 GMT 2012 Rank 37 Aligned Residues 175 % Identity 13% Template c3onmB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator lrha; PDBTitle: effector binding domain of lysr-type transcription factor rovm from y.2 pseudotuberculosis Resolution 2.40 Å

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	I	G	V	D	D	T	F	P	F	S	L	L	A	P	L	I	E	A	F	Y	Q	H	H	S	V	T	R	L	K	F	I	N	G	V	L	G	G	S	W	D	A	L	T	Q	G	R	A	D	I	I	V	G	A	M	H	E	P	P	S	S	S	E	F	G	F	S	R	L	G	D	L	E	Q	V	F	A	V
Query Conservation
Alig confidence																													.																															.	.	.	.
Template Conservation																													.																															.	.	.	.
Template Sequence		S	L	I	I	G	A	S	D	D	T	A	D	T	L	L	P	F	L	L	N	R	V	A	T	L	Y	P	.	L	A	I	D	V	R	V	K	R	S	P	F	I	A	D	M	L	S	S	G	E	V	D	L	A	I	T	T	A	K	.	.	.	.	V	D	S	H	P	H	V	I	L	R	T	S	P	T	L	W	Y	C
Template Known Secondary structure													T	T	T									T	T	S			.										G	G	G							T	T	S		S					S	S		.	.	.	.		S	S	S
Template Predicted Secondary structure																													.																															.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.
Query SS confidence																																			.	.	.	.
Query Sequence		A	P	H	H	P	L	A	L	E	E	E	P	L	N	R	R	I	I	K	R	Y	R	A	I	V	V	G	D	T	A	Q	A	G	.	.	.	.	A	S	T	A	S	Q	L	L	D	E	Q	E	A	I	T	V	F	D	F	K	T	K	L	E	L	Q	I	S	G	L	G	C	G	Y	L	P	R	Y	L	A	Q	R	F
Query Conservation																																			.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.
Template Sequence		S	V	D	Y	Q	F	Q	P	G	E	P	V	.	.	.	.	.	.	.	.	.	P	L	V	V	M	D	E	P	S	L	Y	R	E	M	A	I	E	H	L	T	Q	A	G	V	P	W	R	I	A	Y	V	A	S	S	L	S	A	I	R	A	A	V	R	A	G	L	G	V	T	A	R	P	I	E	M	M	S	P	D
Template Known Secondary structure			T	T					S	S	S			.	.	.	.	.	.	.	.	.						S	S	S														T	T										S	S										T	T	S		B					G	G	G			T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.										.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	S	G	A	L	I	E	K	K	V	V	A	Q	T	L	F	E	P	V	W	I	G	W	N	E	Q	T	A	G	L	A	S	G	W
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		L	R	.	.	V	L	G	E	T	E	G	L	P	G	L	P	E	T	R	Y	V	L	C	K	D	K	Q	C	D	N	E	L	A	L	A
Template Known Secondary structure				.	.				G	G	G	T															S
Template Predicted Secondary structure				.	.
Template SS confidence
		247	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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