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Job DescriptionP76369
Confidence99.63%DateWed Jan 25 15:21:08 GMT 2012
Rank27Aligned Residues213
% Identity13%Templatec3ho7A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:oxyr; PDBTitle: crystal structure of oxyr from porphyromonas gingivalis
Resolution1.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  ENELVIGVDDTFPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFGFSRLGDLEQVF
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Template Sequence  TGRLNIAVLPTIAPYLLPRVFPIWKKELAGLEIHVSEMQTSRCLASLLSGEIDMAIIASKA. . ETEGLEDDLLYYEEFLG
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   90.........100.........110.........120.........130.........140.........150 .........160.......
 
   172.......180.........190.........200...... ...210.........220.........230.........240......
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Query Sequence  AVAPHHPLALEEEPLNRRIIKRYRAIVVGDTAQAG. . . . . ASTASQLLDEQEAITVFDFKTKLELQISGLGCGYLPRYLA
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Template Sequence  YVSRCEPLFEQDV. IRTTEVNPHRLWLLDEGHCFRDQLVRFCQMKGLHERQTAYSGGSMEAFMRLVESGQGITFIPQLTV
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TTSGGGGSSS.B
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   168.170.........180 .........190.........200.........210.........220.........230.........240......
 
   247..250.........260.........270........ .280.........290.........300........
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Query Sequence  QRFLDSGALIEKKVVAQTLFEPVWIGWNEQTA. GLASGWWRDEILANSAIAGVYAKSDDGKSA
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Template Sequence  EQLSPSQKELVRPFGMPRPVREVRLAVRQDYSRRKLREQLIGLLRSAVPSD. MHKLQTGQHLA
Template Known Secondary structure  GGS
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   247..250.........260.........270.........280.........290....... ..300........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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