Job Description P76369 Confidence 99.63% Date Wed Jan 25 15:21:08 GMT 2012 Rank 27 Aligned Residues 213 % Identity 13% Template c3ho7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:oxyr; PDBTitle: crystal structure of oxyr from porphyromonas gingivalis Resolution 1.58 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	E	L	V	I	G	V	D	D	T	F	P	F	S	L	L	A	P	L	I	E	A	F	Y	Q	H	H	S	V	T	R	L	K	F	I	N	G	V	L	G	G	S	W	D	A	L	T	Q	G	R	A	D	I	I	V	G	A	M	H	E	P	P	S	S	S	E	F	G	F	S	R	L	G	D	L	E	Q	V	F
Query Conservation
Alig confidence																																																															.	.
Template Conservation																																																															.	.
Template Sequence		T	G	R	L	N	I	A	V	L	P	T	I	A	P	Y	L	L	P	R	V	F	P	I	W	K	K	E	L	A	G	L	E	I	H	V	S	E	M	Q	T	S	R	C	L	A	S	L	L	S	G	E	I	D	M	A	I	I	A	S	K	A	.	.	E	T	E	G	L	E	D	D	L	L	Y	Y	E	E	F	L	G
Template Known Secondary structure											T	T	T																S	T	T																				T	S		S					S	S			.	.			T	T
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.
Query SS confidence																																					.	.	.	.	.
Query Sequence		A	V	A	P	H	H	P	L	A	L	E	E	E	P	L	N	R	R	I	I	K	R	Y	R	A	I	V	V	G	D	T	A	Q	A	G	.	.	.	.	.	A	S	T	A	S	Q	L	L	D	E	Q	E	A	I	T	V	F	D	F	K	T	K	L	E	L	Q	I	S	G	L	G	C	G	Y	L	P	R	Y	L	A
Query Conservation																																					.	.	.	.	.
Alig confidence															.																						.	.	.	.	.
Template Conservation															.
Template Sequence		Y	V	S	R	C	E	P	L	F	E	Q	D	V	.	I	R	T	T	E	V	N	P	H	R	L	W	L	L	D	E	G	H	C	F	R	D	Q	L	V	R	F	C	Q	M	K	G	L	H	E	R	Q	T	A	Y	S	G	G	S	M	E	A	F	M	R	L	V	E	S	G	Q	G	I	T	F	I	P	Q	L	T	V
Template Known Secondary structure					T	T	S	G	G	G	G	S	S	S	.	B		G	G	G			G	G	G	B				T	T	T	T	T	T	T	S	T	T					T		T	T	T	T		S	S	S				S												T	T								G	G	G	G
Template Predicted Secondary structure															.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		Q	R	F	L	D	S	G	A	L	I	E	K	K	V	V	A	Q	T	L	F	E	P	V	W	I	G	W	N	E	Q	T	A	.	G	L	A	S	G	W	W	R	D	E	I	L	A	N	S	A	I	A	G	V	Y	A	K	S	D	D	G	K	S	A
Query Conservation																																		.
Alig confidence																																		.																			.
Template Conservation																																																					.
Template Sequence		E	Q	L	S	P	S	Q	K	E	L	V	R	P	F	G	M	P	R	P	V	R	E	V	R	L	A	V	R	Q	D	Y	S	R	R	K	L	R	E	Q	L	I	G	L	L	R	S	A	V	P	S	D	.	M	H	K	L	Q	T	G	Q	H	L	A
Template Known Secondary structure		G	G	S						T	T				B		S	S												T	T		S														T	T	S		G	G	.	G	G	S			T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions