Job Description P76369 Confidence 100.00% Date Wed Jan 25 15:21:08 GMT 2012 Rank 1 Aligned Residues 287 % Identity 17% Template c3fzjC_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:lysr type regulator of tsambcd; PDBTitle: tsar low resolution crystal structure, tetragonal form Resolution 7.10 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	V	L	M	I	L	D	A	L	E	K	E	G	S	F	A	A	A	S	A	K	L	Y	K	T	P	S	A	L	S	Y	T	V	H	K	L	E	S	D	L	N	I	Q	L	L	D	R	S	G	H	R	A	K	F	T	R	T	G	K	M	L	L	E	K	G	R	E	V	L	H	T	V	R	E	L	E	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	Q	T	L	Q	A	L	I	C	I	E	E	V	G	S	L	R	A	A	A	Q	L	L	H	L	S	Q	P	A	L	S	A	A	I	Q	Q	L	E	D	E	L	K	A	P	L	L	V	R	T	K	R	G	V	S	L	T	S	F	G	Q	A	F	M	K	H	A	R	L	I	V	T	E	S	R	R	A	Q	E	E
Template Known Secondary structure																S									T	T																		T	S		S					S	S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	K	L	H	E	G	W	E	N	E	L	V	I	G	V	D	D	T	F	P	F	S	L	L	A	P	L	I	E	A	F	Y	Q	H	H	S	V	T	R	L	K	F	I	N	G	V	L	G	G	S	W	D	A	L	T	Q	G	R	A	D	I	I	V	G	A	M	H	E	P	P	S	S	S	E	F	G	F	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	Q	L	R	G	R	W	E	G	H	I	T	F	A	A	S	P	A	I	A	L	A	A	L	P	L	A	L	A	S	F	A	R	E	F	P	D	V	T	V	N	V	R	D	G	M	Y	P	A	V	S	P	Q	L	R	D	G	T	L	D	F	A	L	T	A	A	H	K	H	D	I	D	T	D	L	E	A	Q	P
Template Known Secondary structure																								T														T	T										T	T	T	T							T	S	S	S								G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.
Query Sequence		L	G	D	L	E	Q	V	F	A	V	A	P	H	H	P	L	A	L	E	E	E	P	L	N	R	R	I	I	K	R	Y	R	A	I	V	V	G	D	T	A	Q	A	G	A	S	T	A	S	Q	L	.	.	.	.	.	L	D	E	Q	E	A	I	T	V	F	D	F	K	T	K	L	E	L	Q	I	S	G	L	G	C
Query Conservation																																																				.	.	.	.	.
Alig confidence																					.	.	.																													.	.	.	.	.
Template Conservation																					.	.	.
Template Sequence		L	Y	V	S	D	V	V	I	V	G	Q	R	Q	H	P	M	A	N	A	.	.	.	T	R	L	A	E	L	Q	E	C	R	W	A	F	S	S	A	P	R	G	P	G	A	I	I	R	N	A	F	A	R	Y	G	L	P	E	P	K	L	G	L	V	C	E	S	F	L	A	L	P	G	V	V	A	H	S	D	L	L
Template Known Secondary structure													T	T		T	T	T	T		.	.	.		S	G	G	G	G	T	T	S								T	T	S	T	T										T	T													T	T	T							T	S	S
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		G	Y	L	P	R	Y	L	A	Q	R	F	L	D	S	G	A	L	I	E	K	K	V	V	A	Q	T	L	F	E	P	V	W	I	G	W	N	E	Q	T	A	.	G	L	A	S	G	W	W	R	D	E	I	L	A	N	S
Query Conservation																																										.
Alig confidence																																										.
Template Conservation
Template Sequence		T	T	M	P	R	T	L	Y	E	R	N	A	F	K	D	Q	L	C	S	I	P	L	Q	D	A	L	P	N	P	T	I	Y	V	L	R	R	H	D	L	P	V	T	P	A	A	A	G	L	I	R	W	I	Q	H	H	A
Template Known Secondary structure											S	S	T	T	G	G	G							S	S													T	T	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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