Job Description P76369 Confidence 37.39% Date Wed Jan 25 15:21:08 GMT 2012 Rank 364 Aligned Residues 189 % Identity 14% Template c2q89A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative abc transporter amino acid-binding protein; PDBTitle: crystal structure of ehub in complex with hydroxyectoine Resolution 2.30 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	P	L	I	E	A	F	Y	Q	H	H	S	V	T	R	L	K	F	I	N	G	V	L	G	G	S	W	D	A	L	T	Q	G	R	A	D	I	I	V	G	A	M	H	E	P	P	S	S	S	E	F	G	F	S	R	L	G	D	L	E	Q	V	F	A	V	A	P	H	H	P	L	A	L	E	E	E	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	P	D	V	A	R	E	I	F	K	R	L	G	V	A	D	V	V	A	S	I	S	E	Y	G	A	M	I	P	G	L	Q	A	G	R	H	D	A	I	T	A	G	L	F	M	K	P	E	R	C	A	A	V	A	Y	S	Q	P	I	L	C	D	A	E	A	F	A	L	K	K	G	N	P	L	G	L	K	S	Y
Template Known Secondary structure														T	T											G	G	G							T	T	S		S				S			B							T	T	S				S													T	T		T	T				B
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.
Predicted Secondary structure																																																					.																		.	.	.
Query SS confidence																																																					.																		.	.	.
Query Sequence		N	R	R	I	I	K	R	Y	R	A	I	V	V	G	D	T	A	Q	A	G	A	S	T	A	S	Q	L	L	D	E	Q	E	A	I	T	V	F	D	F	K	T	K	L	E	L	Q	I	S	G	L	G	.	C	G	Y	L	P	R	Y	L	A	Q	R	F	L	D	S	G	A	.	.	.	L	I	E	K	K	V	V	A
Query Conservation																																																					.																		.	.	.
Alig confidence																																																					.																		.	.	.
Template Conservation
Template Sequence		K	D	I	A	D	N	P	D	A	K	I	G	A	P	G	G	G	T	E	E	K	L	A	L	E	A	G	V	P	R	D	R	V	I	V	V	P	D	G	Q	S	G	L	K	M	L	Q	D	G	R	I	D	V	Y	S	L	P	V	L	S	I	N	D	L	V	S	K	A	N	D	P	N	V	E	V	L	A	P	V	E
Template Known Secondary structure						T		T	T							T	T	S										T			G	G	G					S	S											T	S		S																	T		T	T						S		B
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	L	F	E	P	V	W	I	G	W	N	E	Q	T	A	G	L	A	S	G	W	W	R	D	E	I	L	A	N	S	A	I	A	G
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		G	A	P	V	Y	C	D	G	A	A	F	R	K	G	.	.	D	E	A	L	R	D	A	F	D	V	E	L	A	K	L	K	E	S	G
Template Known Secondary structure		T						B						G	G	.	.	G																		T
Template Predicted Secondary structure																.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions