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Job DescriptionP76369
Confidence100.00%DateWed Jan 25 15:21:08 GMT 2012
Rank2Aligned Residues282
% Identity21%Templatec2esnC_
PDB info PDB header:structural genomics, unknown functionChain: C: PDB Molecule:probable transcriptional regulator; PDBTitle: the crystal structure of probable transcriptional regulator pa04772 from pseudomonas aeruginosa
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  KPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVRELE
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Template Sequence  RLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGL
Template Known Secondary structure  S
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   82.......90... ......100.........110.........120.........130.........140.........150.........160
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Query Sequence  KQAIKLHEGWEN. ELVIGVDDTFPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
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Template Sequence  EEWRPFVPGQSQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAERKLSVEALASGRIDFALGYDRL. . . PEGIQ
Template Known Secondary structure  TTS


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   87..90.........100.........110.........120.........130.........140.........150........ .160...
 
   161........170.........180.........190.........200...... ...210.........220.........230......
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Query Sequence  FSRLGDLEQVFAVAPHHPLALEEEPLNRRIIKRYRAIVVGDTAQAG. . . . ASTASQLLDEQEAITVFDFKTKLELQISGL
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Template Sequence  AHDWFADRYVVVARRDHPRL. . AGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGSTD
Template Known Secondary structure 
TT
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   168.170.........180....... ..190.........200.........210.........220.........230.........240.....
 
   237..240.........250.........260.........270.........280.........
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Query Sequence  GCGYLPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASGWWRDEI
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Template Sequence  FLLTAPRHAARALAEAAGLALYPAPFDIPPYVLRLYSHVQH. RDAHAWMIGQL
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   246...250.........260.........270.........280...... ...290.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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