Job Description P76369 Confidence 90.73% Date Wed Jan 25 15:21:08 GMT 2012 Rank 189 Aligned Residues 96 % Identity 15% Template c1mkmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:iclr transcriptional regulator; PDBTitle: crystal structure of the thermotoga maritima iclr Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																																							.
Query SS confidence																				.	.	.																																							.
Query Sequence		M	K	P	L	L	D	V	L	M	I	L	D	A	L	E	K	E	G	.	.	.	S	F	A	A	A	S	A	K	L	Y	K	T	P	S	A	L	S	Y	T	V	H	K	L	E	S	D	L	N	I	Q	L	L	D	R	S	G	H	R	.	A	K	F	T	R	T	G	K	M	L	L	E	K	G	R	E	V	L	H	T
Query Conservation																				.	.	.																																							.
Alig confidence																				.	.	.																										.	.	.											.
Template Conservation																																																.	.	.
Template Sequence		M	N	T	L	K	K	A	F	E	I	L	D	F	I	V	K	N	P	G	D	V	S	V	S	E	I	A	E	K	F	N	M	S	V	S	N	A	Y	K	Y	M	V	V	L	E	E	.	.	.	K	G	F	V	L	R	K	K	D	K	R	Y	V	P	G	Y	K	L	I	E	Y	G	S	F	V	L	R	R	F	N	I
Template Known Secondary structure			T	T															S	S		B									T	T																.	.	.	T	T	S					T	T	S						T
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	E	L	E	K	Q	A	I	K	L	H	E	G	W	E	N	E	L	V	I	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	I	A	H	D	H	L	V	D	I	M	K	R	T	G	E	T	V	H	L	I	L
Template Known Secondary structure															T	T		S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions