 |
Job Description | P07000 | Confidence | 34.53% | Date | Wed Jan 25 15:20:12 GMT 2012 |
Rank | 462 | Aligned Residues | 86 |
% Identity | 16% | Template | c3pg8B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; |
PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima
|
Resolution | 2.00 Å |
|
 |
  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | H | D | R | V | V | V | I | C | P | G | R | I | E | S | Y | V | K | Y | A | E | L | A | Y | D | L | F | H | L | G | F | D | V | L | I | I | D | H | R | G | Q | G | R | S | G | R | L | L | A | D | P | H | L | G | H | V | N | R | F | N | D | Y | V | D | D | L | A | A | F | W | Q | Q | E | V | Q | P | G | P | W | R |
Query Conservation |   |
  |   |   |
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|   |
|   |   |   |
|
|   |   |
|   |
|   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |
|
|   |   |   |   |   |
|
Template Sequence |   |
S | Y | N | K | P | V | L | L | K | R | G | F | M | N | T | I | E | E | F | L | L | S | A | E | Y | I | A | N | S | G | N | T | K | I | I | L | C | E | R | G | I | R | T | F | E | K | A | T | R | N | T | L | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | S | A | V | P | I | I | R | K | E | S | H | L | P |
Template Known Secondary structure |   |
G | G |
| S |
|  |  |  |  |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |
|
| B |
|
| S |
| S | S | S | S | S | B |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | T | T |  |  |  |  |  |  |  |  | B | S | S |
|
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 260 | . | . | . | . | . |
  |
  |   |
132 | . | . | . | . | . | . | . | 140 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | R | Y | I | L | A | H | S | M | G | . |
. |
. |
. |
. |
G | A | I | S | T | L | F | L | Q |
Query Conservation |   |
  |   |   |
|
|
|
|
|   |
| . | . | . | . | . |
|   |
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |
|
|   |
|   |   |   |   |
|   |   |
|   |   |
|
|
|
|
Template Sequence |   |
I | L | V | D | P | S | H | S | G | G | R | R | D | L | V | I | P | L | S | R | A | A | I | A |
Template Known Secondary structure |   |
 |  |  |
| T | T | T | T | T |
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
266 | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|