 |
Job Description | P07000 | Confidence | 38.23% | Date | Wed Jan 25 15:20:12 GMT 2012 |
Rank | 435 | Aligned Residues | 48 |
% Identity | 13% | Template | c3pa8A_ |
PDB info |
PDB header:toxin/peptide inhibitor | Chain: A: PDB Molecule:toxin b; |
PDBTitle: structure of the c. difficile tcdb cysteine protease domain in complex2 with a peptide inhibitor
|
Resolution | 2.00 Å |
|
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
. | . | . | . | . | . | . | . | 140 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Q | G | R | S | G | R | L | L | A | D | P | H | L | G | H | V | N | R | F | N | D | Y | V | D | D | L | A | A | F | W | Q | Q | E | V | Q | P | G | P | W | R | . |
. |
K | R | Y | I | L | A | H | S | M | G |
Query Conservation |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |
|   |   | . | . | . |   |
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|
|
|
|   |
Template Sequence |   |
G | H | G | K | D | E | F | N | T | D | . |
. |
. |
I | F | A | G | F | D | V | D | S | L | S | T | E | I | E | A | A | I | D | L | A | K | E | D | I | S | P | K | S | I | E | I | N | L | L | G | C | N | M | F |
Template Known Secondary structure |   |
|
|
|
| S | S |
|
| S | S | . | . | . |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
| S |  |  |  |  |  |  |  | S | S | S |
|
|
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
| . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
109 | 110 | . | . | . | . | . | . | . | . | |
|
|
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|