Phyre 2 alignment of P07000 with c3ib3A

Job Description P07000
Confidence 99.83% Date Wed Jan 25 15:20:12 GMT 2012

Rank 154 Aligned Residues 255

% Identity 13% Template c3ib3A_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:coce/nond family hydrolase; PDBTitle: crystal structure of sacol2612 - coce/nond family hydrolase from2 staphylococcus aureus

Resolution 2.05 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.																			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	R	D	E	A	E	F	T	G	V	D	D	I	P	V	R	F	V	R	F	R	A	Q	H	H	D	.	.	R	V	V	V	I	C	P	G	R	I	E	S	Y	V	K	Y	A	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	D	L	F	H	L	G	F	D	V	L	I	I	D	H
Query Conservation																										.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	E	K	D	G	T	V	E	X	R	D	G	E	K	L	Y	I	N	I	F	R	P	N	K	D	G	K	F	P	V	V	X	S	A	D	T	Y	G	K	D	N	K	X	G	A	L	W	P	T	L	G	T	I	P	T	S	S	F	T	P	E	E	S	P	D	P	G	F	W	V	P	N	D	Y	V	V	V	K	V	A	L
Template Known Secondary structure									T	T	S											S	S	S	S										S	S		T	T				T	T	T	S	G	G	G							T	T			T	T	S							G	G	G	T
Template Predicted Secondary structure
Template SS confidence
	41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence	R	G	Q	G	R	S	G	R	L	L	A	D	P	H	L	G	H	V	N	R	F	N	D	Y	V	D	D	L	A	A	F	W	Q	Q	E	V	Q	P	G	P	W	R	.	K	R	Y	I	L	A	H	S	M	G	G	A	I	S	T	L	F	L	Q	R	H	P	G	V	C	D	A	I	A	L	T	A	P	M	F	G	I
Query Conservation																																											.
Alig confidence										.	.	.	.	.	.	.																											.																																					.
Template Conservation										.	.	.	.	.	.	.																																																																.
Template Sequence	R	G	S	D	K	S	K	G	V	.	.	.	.	.	.	.	L	S	P	W	S	K	R	E	A	E	D	Y	Y	E	V	I	E	W	A	A	N	Q	S	W	S	N	G	N	I	G	T	N	G	V	S	Y	L	A	V	T	Q	W	W	V	A	S	L	N	P	P	H	L	K	A	X	I	P	W	E	G	L	N	D	.
Template Known Secondary structure	T	T	S	T	T			S		.	.	.	.	.	.	.	B		S	S	S															T	T	S	T	T											T											T	T			T	T								S				B	.
Template Predicted Secondary structure										.	.	.	.	.	.	.																																																																.
Template SS confidence
	126	.	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

	169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	I	R	M	P	S	F	M	A	R	Q	I	L	N	W	A	E	A	H	P	R	F	R	D	G	Y	A	I	G	T	G	R	W	R	A	L	P	F	A	I	N	V	L	T	H	S	R	Q	R	Y	R	R	N	L	R	F	Y	A	D	D	P	T	I	R	V	G	G	P	T	Y	H	W	V	R	E	S	I	L	A	G
Query Conservation
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	Y	R	E	V	A	F	H	G	G	I	P	D	T	G	F	Y	R	F	W	T	Q	G	I	F	A	R	W	T	D	N	P	N	I	E	D	L	I	Q	A	Q	Q	E	H	P	L	F
Template Known Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T			T	T					S													S	T	T		T	T	B												S	S
Template Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

	249	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence	E	Q	V	L	A	.	.	.	.	G	A	G	D	D	A	T	P	T	L	L	L	Q	A	E	E	E	R	V	V	D	N	R	M	H	D	R	F	C	E	L	R	T	A	A	G	H	P	V	E	G	G	R	P	L	V	I	K	G	A	Y	H	E	I	L	F	E	K	D	A	M	R	S	V	A	L	H	A	I	V	D
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.																																	.	.	.	.	.	.																						.	.	.	.
Template Conservation																																										.	.	.	.	.	.																						.	.	.	.
Template Sequence	D	D	F	W	K	Q	R	Q	V	P	L	S	Q	I	K	T	P	L	L	T	C	A	S	W	S	T	Q	G	L	H	N	R	G	S	F	E	G	F	K	Q	A	.	.	.	.	.	.	A	S	E	E	K	W	L	Y	V	H	G	R	K	E	W	E	S	Y	Y	A	R	.	.	.	.	E	N	L	E	R	Q	K	S
Template Known Secondary structure						T	T	B			G	G	G			S								G	G	G	T	T	T	T												.	.	.	.	.	.			S	S							S	S							S	S		.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.																						.	.	.	.
Template SS confidence
	245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.							.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.					.	.	.	310	.	.	.	.

	325	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	F	F	N	R	H	N	S	P	S	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence	F	F	D	F	Y	L	K	E	E	N	N
Template Known Secondary structure						T	S
Template Predicted Secondary structure
Template SS confidence
	315	.	.	.	.	320	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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