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Job DescriptionP07000
Confidence99.75%DateWed Jan 25 15:20:12 GMT 2012
Rank184Aligned Residues226
% Identity15%Templatec3hxkB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:sugar hydrolase; PDBTitle: crystal structure of a sugar hydrolase (yeeb) from2 lactococcus lactis, northeast structural genomics3 consortium target kr108
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.... .....70.........80.........90.........100........
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Query Sequence  EAEFTGVDDIPVRFVRFRAQHHDRVVVICPGRI. . . ESYVKYAELAYDLFHLGFDVLIIDHRGQGRSGRLLADPHLGHVN
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Template Sequence  KSTFSLNDTAWVDFYQLQ. NYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVXNKGT. . . . . . . . . NYN
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BTTB


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   16...20.........30... ......40.........50.........60.........70.........80.. ...
 
   109110.........120....... ..130.........140.........150.........160.........170.........180...
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Query Sequence  RFNDYVDDLAAFWQQEVQP. . . . . GPWRKRYILAHSMGGAISTLFLQRHPGVCDAIALTAPMFGIVIRMPSFMARQILNW
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Template Sequence  FLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSF. . . . . . . . . . . . . .
Template Known Secondary structure  TTTTTTB
TTS
SSS
STT

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   92.......100.........110.........120.........130.........140.........150.......
 
   184.....190.........200.........210.........220.........230.........240.........250.........260...
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Query Sequence  AEAHPRFRDGYAIGTGRWRALPFAINVLTHSRQRYRRNLRFYADDPTIRVGGPTYHWVRESILAGEQVLAGAGDDATPTL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TFGWPSDLSHFNFEIENISEYNISEKVTSSTPPTF
Template Known Secondary structure  .............................................TSS
SSSSSSS



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   158.160.........170.........180.........190..
 
   264.....270.........280.........290.........300....... ..310.........320.........
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Query Sequence  LLQAEEERVVDNRMHDRFCELRTAAGHPVEGGRPLVIKGAYHEI. . . . . . . . . . LFEKDAMRSVALHAIVDFFNRH
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Template Sequence  IWHTADDEGVPIYNSLKYCDRLSKHQV. . . PFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQ
Template Known Secondary structure  TT
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TTTT
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   193......200.........210......... 220.........230.........240.........250.........260.....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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