Job Description P07000 Confidence 98.00% Date Wed Jan 25 15:20:12 GMT 2012 Rank 269 Aligned Residues 128 % Identity 19% Template c3biwD_ PDB info PDB header:cell adhesion/cell adhesion Chain: D: PDB Molecule:neuroligin-1; PDBTitle: crystal structure of the neuroligin-1/neurexin-1beta synaptic adhesion2 complex Resolution 3.50 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																	.	.	.																		.										.	.	.	.
Query SS confidence																	.	.	.																		.										.	.	.	.
Query Sequence		A	Q	H	H	D	R	V	V	V	I	C	P	G	R	I	.	.	.	E	S	Y	V	K	Y	A	E	L	A	Y	D	L	F	H	L	G	.	F	D	V	L	I	I	D	H	R	.	.	.	.	G	Q	G	R	S	G	R	L	L	A	D	P	H	L	G	H	V	N	R	F	N	D	Y	V	D	D	L	A	A	F	W
Query Conservation																	.	.	.																		.										.	.	.	.
Alig confidence																	.	.	.								.	.									.										.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																											.	.																																	.	.	.	.	.	.	.	.
Template Sequence		S	G	G	P	K	P	V	M	V	Y	I	H	G	G	S	Y	M	E	G	T	G	N	L	Y	D	.	.	G	S	V	L	A	S	Y	G	N	V	I	V	I	T	V	N	Y	R	L	G	V	L	G	F	L	S	T	G	D	Q	A	A	.	.	.	.	.	.	.	.	K	G	N	Y	G	L	L	D	L	I	Q	A	L
Template Known Secondary structure				S											S	S	S	S	S			T	T	T	S		.	.									T																	B		S	S	S	S		.	.	.	.	.	.	.	.	B
Template Predicted Secondary structure																											.	.																																	.	.	.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.									.	.	.	.	250	.	.	.	.	.	.	.	.
		122	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.																									.	.	.
Query SS confidence									.	.	.	.	.																									.	.	.
Query Sequence		Q	Q	E	V	Q	P	G	.	.	.	.	.	P	W	R	K	R	Y	I	L	A	H	S	M	G	G	A	I	S	T	L	F	L	Q	R	H	.	.	.	P	G	V	C	D	A	I	A	L	T	A	P	M	F	G	I	V	I	R	M	P	S	F	M	A	R	Q	I	L	N	W	A	E	A	H
Query Conservation									.	.	.	.	.																									.	.	.
Alig confidence									.	.	.	.	.																									.	.	.
Template Conservation
Template Sequence		R	W	T	S	E	N	I	G	F	F	G	G	D	P	L	R	I	T	V	F	G	S	G	A	G	G	S	C	V	N	L	L	T	L	S	H	Y	S	E	K	G	L	F	Q	R	A	I	A	Q	S	G	T	A	L	S	S	W	A	V	S	F	Q	P	A	K	Y	A	R	I	L	A	T	K	V
Template Known Secondary structure								G	G	G	G	T												T										T	T	S	T	T	S		T	T	S								T			S	S	S	T	T	S	S		S													T
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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