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Job DescriptionP07000
Confidence99.80%DateWed Jan 25 15:20:12 GMT 2012
Rank169Aligned Residues267
% Identity9%Templatec2veoA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:lipase a; PDBTitle: x-ray structure of candida antarctica lipase a in its2 closed state.
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.. .......70.........80.........90.........100..
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Query Sequence  FVRFRAQHHDRVVVICPG. . . . . . . . . . . . . . . . . . . . . . RIESYVKYAELAYDLFHLGFDVLIIDHRGQGRSGRLLADP
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Template Sequence  WIPAKPASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFK. . . . . . . . A
Template Known Secondary structure 
SS

SS





SSGGG
BS
S

TTGGGGTSSTT

TTTTT........T
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   76...80.........90.........100.........110.........120.........130.........140...... .
 
   103......110.........120.........130.........140.........150.... .....160........ .170
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Query Sequence  HLGHVNRFNDYVDDLAAFWQQEVQPGPWRKRYILAHSMGGAISTLFLQRHPG. . . . . VCDAIALTAPMFGI. . . . . . . VI
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Template Sequence  AFIAGYEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLADSYAPELNIVGASHGGTPVSAKDTFTFLNG
Template Known Secondary structure 
TT
TT

TT
T
TTSS


BTT
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   148.150.........160.........170.........180.........190.........200.........210.........220.......
 
   171........180.........190.........200.........210.........220... ......230.........240...
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Query Sequence  RMPSFMARQILNWAEAHPRFRDGYAIGTGRWRALPFAINVLTHSRQRYRRNLR. . . . . . . FYADDPTIRVGGPTYHWVRE
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Template Sequence  GPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQQTLKQIRGRGFCLPQVVLTYPFLNVFSLVNDTNLLNEAPIAGILKQ
Template Known Secondary structure  STTT
TTB
TSTT


TT

GGGGBS
TTGGGSTT
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   228.230.........240.........250.........260.........270.........280.........290.........300.......
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  SILAGEQVLAGAGDDATPTLLLQAEEERVVDNRMHDRFCELRTAAGHPVEGGRPLVIKGAYHEILFEKDAMRSVALHAIV
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Template Sequence  ETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGA. . . NINFSPYPIAEHLTAE. . . . . . IFGLVPSL
Template Known Secondary structure  SB

TTT
SS





STT
SSS
TT
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......T
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   308.310.........320.........330.........340.........350.... .....360.........370 ........
 
   324....
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Query Sequence  DFFNR
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Template Sequence  WFIKQ
Template Known Secondary structure 
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   379380...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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