Job Description P07000 Confidence 99.93% Date Wed Jan 25 15:20:12 GMT 2012 Rank 113 Aligned Residues 244 % Identity 17% Template c2qtbB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dipeptidyl peptidase 4; PDBTitle: human dipeptidyl peptidase iv/cd26 in complex with a 4-aryl2 cyclohexylalanine inhibitor Resolution 2.25 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.															.	.	.	.	.
Query SS confidence																										.	.	.	.	.															.	.	.	.	.
Query Sequence		Q	R	D	E	A	E	F	T	G	V	D	D	I	P	V	R	F	V	R	F	R	A	Q	H	.	.	.	.	.	H	D	R	V	V	V	I	C	P	G	R	I	E	S	.	.	.	.	.	Y	V	K	Y	A	E	L	A	Y	D	L	F	H	L	G	F	D	V	L	I	I	D	H	R	G	Q	G	R	S	G	R	L
Query Conservation																										.	.	.	.	.															.	.	.	.	.
Alig confidence																										.	.	.	.	.															.	.	.	.	.																															.	.
Template Conservation																																																																																.	.
Template Sequence		P	S	K	K	L	D	F	I	I	L	N	E	T	K	F	W	Y	Q	M	I	L	P	P	H	F	D	K	S	K	K	Y	P	L	L	L	D	V	Y	A	G	P	C	S	Q	K	A	D	T	V	F	R	L	N	W	A	T	Y	L	A	S	T	E	N	I	I	V	A	S	F	D	G	R	G	S	G	Y	Q	G	.	.
Template Known Secondary structure												T	T											T	T			T	T	S												T	T											S								T	T										T	T		S	S	S		.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		L	A	D	P	H	L	G	H	V	N	R	F	N	D	Y	V	D	D	L	A	A	F	W	Q	Q	E	V	Q	P	G	.	.	P	W	R	K	R	Y	I	L	A	H	S	M	G	G	A	I	S	T	L	F	L	Q	R	H	P	G	V	C	D	A	I	A	L	T	A	P	M	F	G	I	V	I	R	M	P	S	F	M
Query Conservation																																.	.
Alig confidence																																.	.
Template Conservation
Template Sequence		D	K	I	M	H	A	I	N	R	R	L	G	T	F	E	V	E	D	Q	I	E	A	A	R	Q	F	S	K	M	G	F	V	D	N	K	R	I	A	I	W	G	W	S	Y	G	G	Y	V	T	S	M	V	L	G	S	G	S	G	V	F	K	C	G	I	A	V	A	P	V	S	R	W	E	Y	Y	D	S	V	Y	T
Template Known Secondary structure						G	G	G	T	T		T	T	S															T	T	S	S												T											T	T	T		S			S						S					G	G	G	S	B
Template Predicted Secondary structure
Template SS confidence
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	Q	I	L	N	W	A	E	A	H	P	R	F	R	D	G	Y	A	I	G	T	G	R	W	R	A	L	P	F	A	I	N	V	L	T	H	S	R	Q	R	Y	R	R	N	L	R	F	Y	A	D	D	P	T	I	R	V	G	G	P	T	Y	H	W	V	R	E	S	I	L	A	G	E	Q	V	L	A	G	A	G
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	Y	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	T	P	E	D	N	L	D	H	Y	R	N	S	T	V	M	S	R	A	E
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	T	T	T	T							S		S	G	G	G	G	G
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		668	.	670	.	.																																																							.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.
		257	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		D	D	A	.	T	P	T	L	L	L	Q	A	E	E	E	R	V	V	D	N	R	M	H	D	R	F	C	E	L	R	T	A	A	G	H	P	V	E	G	G	R	P	L	V	I	K	G	A	Y	H	E	I	L	F	E	K	D	A	M	R	S	V	A	L	H	A	I	V	D	F	F	N	R	H	N	S	P	S
Query Conservation					.
Alig confidence					.																																.	.	.															.	.
Template Conservation																																					.	.	.															.	.
Template Sequence		N	F	K	Q	V	E	Y	L	L	I	H	G	T	A	D	D	N	V	H	F	Q	Q	S	A	Q	I	S	K	A	L	V	D	V	G	V	.	.	.	D	F	Q	A	M	W	Y	T	D	E	D	H	G	I	.	.	A	S	S	T	A	H	Q	H	I	Y	T	H	M	S	H	F	I	K	Q	C	F	S	L	P
Template Known Secondary structure		G	G	G	G	S								T	T		S	S	S		T													T	T		.	.	.								T	T			T	T		.	.		S																			T	T
Template Predicted Secondary structure																																					.	.	.															.	.
Template SS confidence
		694	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.				.	730	.	.	.	.	.	.	.	.	.	740	.	.			.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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