Job Description P07000 Confidence 99.94% Date Wed Jan 25 15:20:12 GMT 2012 Rank 104 Aligned Residues 238 % Identity 19% Template c2ecfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidyl peptidase iv; PDBTitle: crystal structure of dipeptidyl aminopeptidase iv from2 stenotrophomonas maltophilia Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.									.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure											.																.	.	.	.	.														.	.	.	.	.	.	.	.
Query SS confidence											.																.	.	.	.	.														.	.	.	.	.	.	.	.
Query Sequence		D	E	A	E	F	T	G	V	D	.	D	I	P	V	R	F	V	R	F	R	A	Q	H	H	D	.	.	.	.	.	R	V	V	V	I	C	P	G	R	I	E	S	Y	.	.	.	.	.	.	.	.	V	K	Y	A	E	L	A	Y	D	L	F	H	L	G	F	D	V	L	I	I	D	H	R	G	Q	G	R	S	G
Query Conservation											.																.	.	.	.	.														.	.	.	.	.	.	.	.
Alig confidence											.																.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	F	G	T	L	T	A	A	D	G	K	T	P	L	N	Y	S	V	I	K	P	A	G	F	D	P	A	K	R	Y	P	V	A	V	Y	V	Y	G	G	P	A	S	Q	T	V	T	D	S	W	P	G	R	G	D	H	L	F	N	Q	Y	L	A	Q	Q	G	Y	V	V	F	S	L	D	N	R	G	T	P	R	R	G
Template Known Secondary structure									T	T	S	S											S	S			T	T	S											S	T	T			S		S	S					S												T	T									T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		R	L	L	A	D	P	H	L	G	H	V	N	R	F	N	D	Y	V	D	D	L	A	A	F	W	Q	Q	E	V	Q	P	.	.	G	P	W	R	K	R	Y	I	L	A	H	S	M	G	G	A	I	S	T	L	F	L	Q	R	H	P	G	V	C	D	A	I	A	L	T	A	P	M	F	G	I	V	I	R	M	P	S
Query Conservation																																	.	.
Alig confidence		.	.																														.	.
Template Conservation		.	.
Template Sequence		.	.	R	D	F	G	G	A	L	Y	G	K	Q	G	T	V	E	V	A	D	Q	L	R	G	V	A	W	L	K	Q	Q	P	W	V	D	P	A	R	I	G	V	Q	G	W	S	N	G	G	Y	M	T	L	M	L	L	A	K	A	S	D	S	Y	A	C	G	V	A	G	A	P	V	T	D	W	G	L	Y	D	S	H
Template Known Secondary structure		.	.						T	T	T	T		T	T	T															T	S	T	T												T														T	T	T		S						S					G	G	G	S	B
Template Predicted Secondary structure		.	.
Template SS confidence
				568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	A	R	Q	I	L	N	W	A	E	A	H	P	R	F	R	D	G	Y	A	I	G	T	G	R	W	R	A	L	P	F	A	I	N	V	L	T	H	S	R	Q	R	Y	R	R	N	L	R	F	Y	A	D	D	P	T	I	R	V	G	G	P	T	Y	H	W	V	R	E	S	I	L	A	G	E	Q	V	L	A	G
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	T	E	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	D	L	P	A	R	N	D	A	G	Y	R	E	A	R	V	L	T	H
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	G	G	G									S	G	G	G
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		646	.	.	.	650																																																									.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	D	D	A	T	P	T	L	L	L	Q	A	E	E	E	R	V	V	D	N	R	M	H	D	R	F	C	E	L	R	T	A	A	G	H	P	V	E	G	G	R	P	L	V	I	K	G	A	Y	H	E	I	L	F	E	K	D	A	M	R	S	V	A	L	H	A	I	V	D	F	F	N	R	H	N	S	P
Query Conservation
Alig confidence																																						.	.	.															.	.	.
Template Conservation																																						.	.	.															.	.	.
Template Sequence		I	E	G	L	R	S	P	L	L	L	I	H	G	M	A	D	D	N	V	L	F	T	N	S	T	S	L	M	S	A	L	Q	K	R	G	Q	.	.	.	P	F	E	L	M	T	Y	P	G	A	K	H	G	L	.	.	.	S	G	A	D	A	L	H	R	Y	R	V	A	E	A	F	L	G	R	C	L	K	P
Template Known Secondary structure		G	G	G			S								T	T		S	S	S		T													T	T		.	.	.								T	T			S	S		.	.	.
Template Predicted Secondary structure																																						.	.	.															.	.	.
Template SS confidence
		670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.				.	.	.	.	710	.	.	.	.	.	.	.	.	.				720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions