Job Description P07000 Confidence 95.06% Date Wed Jan 25 15:20:12 GMT 2012 Rank 289 Aligned Residues 131 % Identity 16% Template c1gxsC_ PDB info PDB header:lyase Chain: C: PDB Molecule:p-(s)-hydroxymandelonitrile lyase chain a; PDBTitle: crystal structure of hydroxynitrile lyase from sorghum2 bicolor in complex with inhibitor benzoic acid: a novel3 cyanogenic enzyme Resolution 2.3 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.																			.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.																	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.																	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	F	T	G	.	.	V	D	D	I	P	V	R	F	V	R	F	R	A	Q	H	H	.	.	.	.	D	R	V	V	V	I	C	P	G	R	I	E	S	Y	V	K	Y	A	E	L	A	Y	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	H	L	G	F	D	V	L	I	I	D
Query Conservation							.	.																	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	Y	V	T	I	D	D	N	N	G	R	A	L	Y	Y	W	F	Q	E	A	D	T	A	D	P	A	A	A	P	L	V	L	W	L	N	G	G	P	G	C	S	S	I	G	L	G	A	M	Q	E	L	G	A	F	R	V	H	T	N	G	E	S	L	L	L	N	E	Y	A	W	N	K	A	A	N	I	L	F	A	E
Template Known Secondary structure								T	T	T	T												S	S		G	G	G	S									T	T	T			T	T	T	T					T	S	S	S					T	T	S	S						T	T		G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		89	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.								.	.
Predicted Secondary structure				.																																							.	.	.																												.	.	.	.	.	.	.
Query SS confidence				.																																							.	.	.																												.	.	.	.	.	.	.
Query Sequence		H	R	.	G	Q	G	R	S	G	R	L	L	A	D	P	H	L	G	H	V	N	R	F	N	D	Y	V	D	D	L	A	A	F	W	Q	Q	E	V	Q	P	G	.	.	.	P	W	R	K	R	Y	I	L	A	H	S	M	G	G	A	I	S	T	L	F	L	Q	R	H	P	G	V	.	.	.	.	.	.	.	C	D
Query Conservation				.																																							.	.	.																												.	.	.	.	.	.	.
Alig confidence				.													.	.	.																								.	.	.												.																.	.	.	.	.	.	.
Template Conservation																	.	.	.																																						.
Template Sequence		S	P	A	G	V	G	F	S	Y	S	N	T	S	S	D	.	.	.	L	S	M	G	D	D	K	M	A	Q	D	T	Y	T	F	L	V	K	W	F	E	R	F	P	H	Y	N	Y	R	E	F	Y	I	A	G	E	S	.	G	H	F	I	P	Q	L	S	Q	V	V	Y	R	N	R	N	N	S	P	F	I	N	F	Q
Template Known Secondary structure			S	T	T	S	T	T				S	S	G	G	G	.	.	.	G																						S	G	G	G	T	T								S		.	T	T												T	T	T	T	S	T	T	S
Template Predicted Secondary structure																	.	.	.																																						.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		158	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	L	T	A	P	M	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	L	V	S	S	G	L	T	N
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions