 |
Job Description | P0CF13 | Confidence | 74.69% | Date | Thu Jan 5 11:30:46 GMT 2012 |
Rank | 449 | Aligned Residues | 28 |
% Identity | 11% | Template | d2gaua1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| CAP C-terminal domain-like
|
Resolution | 1.90 |
|
  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | G | C | R | A | T | A | R | I | M | G | V | G | L | N | T | I | L | R | H | L | K | N | S | G | R | S |
Query Conservation |   |
  |   |
|   |
|   |
|
|
|   |
|
|
|
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |
|
|   |   |
|
|   |
|
|   |
|
|
|
|   |
|   |   |
|   |   |   |
Template Sequence |   |
Y | L | S | R | E | E | L | A | T | L | S | N | M | T | V | S | N | A | I | R | T | L | S | T | F | V | S | E |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|