 |
Job Description | P0CF13 | Confidence | 92.25% | Date | Thu Jan 5 11:30:46 GMT 2012 |
Rank | 98 | Aligned Residues | 33 |
% Identity | 33% | Template | d1jhga_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| TrpR-like
| Trp repressor, TrpR
|
Resolution | 1.30 |
|
  |   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | T | H | Q | K | I | I | D | M | A | M | N | G | . |
V | G | C | R | A | T | A | R | I | M | G | V | G | L | N | T | I | L | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   | . |   |
|   |
|   |
|
|
|   |
|
|
|
|   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |
|   |   |   |
|
|   |   |   |   |
|
|
|
|
|   |   |   |   |
|   |
|   |
|
|
|
|
|
Template Sequence |   |
L | G | T | R | V | R | I | I | E | E | L | L | R | G | E | M | S | Q | R | E | L | K | N | E | L | G | A | G | I | A | T | I | T | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|