Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF13
Confidence86.11%DateThu Jan 5 11:30:46 GMT 2012
Rank265Aligned Residues37
% Identity16%Templated1ixca1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain LysR-like transcriptional regulators
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70.........80.........
Predicted Secondary structure 






Query SS confidence 




































Query Sequence  HQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGR
Query Conservation        
     
 
 


 



  

 
 
     
Alig confidence 




































Template Conservation   
  
  
   

 
 

  
 






  
  

 
Template Sequence  QLKYFIAVAEAGNXAAAAKRLHVSQPPITRQXQALEA
Template Known Secondary structure  SST

Template Predicted Secondary structure 




Template SS confidence 




































   5....10.........20.........30.........40.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions