Return to main results Retrieve Phyre Job Id

Job DescriptionP17993
Confidence99.80%DateThu Jan 5 11:36:26 GMT 2012
Rank69Aligned Residues159
% Identity13%Templated1yzha1
SCOP infoS-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases TrmB-like
Resolution2.02

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   55....60.........70........ .80.........90.........100.........110....... ..120.........130
Predicted Secondary structure 









..



















..




Query SS confidence 























. .






































. .












Query Sequence  LFGKKVLDVGCGGGILAESMAREG. . ATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAA. . KHAGQYDVVTCME
Query Conservation    
  






 
     

   ..  
 
 
 
                              ..      
 
    
Alig confidence 























..






































..












Template Conservation       






 
      
   
   
 


 
   
  
       
                      

 
    
Template Sequence  NDNPIHVEVGSGKGAFVSGXAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF
Template Known Secondary structure  S


S
TTS
TTSS


SS

SS
GGGTS
TT

SS
Template Predicted Secondary structure 































Template SS confidence 















































































   37..40.........50.........60.........70.........80.........90.........100.........110......
 
   131....... .140.........150.........160.........170..... ....180.........190.........200
Predicted Secondary structure 



........








..














Query SS confidence 







. . . . . . . .




































. .
























Query Sequence  MLEHVPDP. . . . . . . . QSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAE. . YILRMVPKGTHDVKKFIKPAELLGW
Query Conservation        
 ........   
  
   




   
   
              ..                     
   
Alig confidence 







........




































..
























Template Conservation                     
    
 




 
 
 

                                    
  
  
Template Sequence  SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGXKLNGVWLDLHASDFEGNVXTEYEQK
Template Known Secondary structure 




SGGGGGGSTTSS
TT
S
T
SSGGGS







Template Predicted Secondary structure 

































Template SS confidence 















































































   117..120.........130.........140.........150.........160.........170.........180.........190......
 
   201........210...
Predicted Secondary structure 


Query SS confidence 












Query Sequence  VDQTSLKERHITG
Query Conservation 
  


       
Alig confidence 












Template Conservation      
  
 
   
Template Sequence  FSNKGQVIYRVEA
Template Known Secondary structure  TGGG



Template Predicted Secondary structure 



Template SS confidence 












   197..200.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions