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Job DescriptionP17993
Confidence99.67%DateThu Jan 5 11:36:26 GMT 2012
Rank123Aligned Residues142
% Identity18%Templatec3p2kA_
PDB info PDB header:transferaseChain: A: PDB Molecule:16s rrna methylase; PDBTitle: structure of an antibiotic related methyltransferase
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70......... 80.........90.........100.... .....110........
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Query Sequence  GYIAERAGGLFGKKVLDVGCGGGILAESMAREGA. . TVTGLDMGFEPLQVAKLHALESGIQ. . . . . VDYVQETVEEHAAK
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Template Sequence  KDELTEIIGQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFE
Template Known Secondary structure  TSST
TTS
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GGGGTS
GGGT

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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   119120......... 130...... ...140.........150.........160.........170.........180.........190...
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Query Sequence  HAGQYDVVTCM. . . . EMLEHVP. DPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIK
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Template Sequence  LKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYKAYFL. . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GTT
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   94.....100.........110.........120.........130.........140......
 
   194.....200.........210....
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Query Sequence  PAELLGWVDQTSLKERHITGL
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Template Sequence  SEQYKAELSNSGFRIDDVKEL
Template Known Secondary structure  STTT
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   165....170.........180.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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